| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0525 |
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| Symbol | |
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| ID | 5134359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 580676 |
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| End bp | 581467 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530847 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001215364 |
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| Protein GI | 147672157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CGCAACTGGC GCTCACTTTA TTAATGACTC TTGGCTTAGC GGCATGCAGC
GCTTCACCGA CAGGCCGAAA TCAATTGCTA CTGTTTTCTG ACAACGACAT GAGTCAGCTT
GGCGCGAAGT CTTTCACGCA GATGAAACAG GAAATTCCAA TCAGTAAAGA TGCAAAAACC
AATGCGTATG TGCAGTGTGT AACCAAAGCG ATTACCGCTC AAGTACCCAA GCAAAGTAGT
TTTGAGCAAT GGGAAGTGGT CGTGTTTGAG AGTGACCAAG TTAACGCGTT TGCCTTGCCG
GGTGGGAAAA TTGGGGTATA CACGGGTCTA CTGAAGGTTG CGGTGAATCA GGACCAGTTA
GCGACCGTGA TTGGCCATGA AATCGCTCAT GTGCTGTCAA ACCACAGTAA TGAGCGTTTA
TCGCAATCAC AATTAGCGCA TGCCGGCTTA CAACTGACGG ATATCGCAAT TGGGGCATCT
GAATATGCGC AATATCGTAA TCTGACCATG TCCGCGCTCG GCGTTGGTGT GCAATACGGG
GTAATTTTGC CCTATGGCCG CAGCCAAGAG TCAGAAGCCG ATATATTAGG ATTGGCCTTG
ATGGCAAGAG CAGGCTTTGA TCCTTATCAG AGCATTGAGC TTTGGAAAAA TATGGCCAAA
GCGTCTGGAG GAAAACAGCC GCCTGAGCTG CTTTCGACCC ACCCATCACA CAGCACCCGT
ATCAGCGATT TGAGTGCAAC GATCAGTACA CTGCCACCAC ATCAAGGTTC TAAAGCTCAG
TGTGCTCTCT AG
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| Protein sequence | MKKTQLALTL LMTLGLAACS ASPTGRNQLL LFSDNDMSQL GAKSFTQMKQ EIPISKDAKT
NAYVQCVTKA ITAQVPKQSS FEQWEVVVFE SDQVNAFALP GGKIGVYTGL LKVAVNQDQL
ATVIGHEIAH VLSNHSNERL SQSQLAHAGL QLTDIAIGAS EYAQYRNLTM SALGVGVQYG
VILPYGRSQE SEADILGLAL MARAGFDPYQ SIELWKNMAK ASGGKQPPEL LSTHPSHSTR
ISDLSATIST LPPHQGSKAQ CAL
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