| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0517 |
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| Symbol | |
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| ID | 5134358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 570754 |
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| End bp | 573435 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530839 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215356 |
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| Protein GI | 147672312 |
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| COG category | [C] Energy production and conversion
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming)
[COG1247] Sortase and related acyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCACT TGAATCAATT GCTTAGACCC AAATCTGTCG CTGTGATTGG GGCATCCGTT
CGGTCTTTCC GTGCGGGTAA TATTGTGATG AAAAACTTAC TTCAAGGTGG TTTTGATGGC
GCCATTATGC CTGTCACGCC CTATTATCCT GCCGTTTGTG GTGTATTGGC TTACAAAACG
ATTTCCGACC TCCCGATTGT GCCTGATATT GCGATTCTTT GTACTCACGC CTCGCGCAAT
GTCAGCTTAT TTAAACAGTT AGCCGAGAAA GGAGTCAGAC AAGTGATTGT TTTATCTTCC
GATATGTACT CTTTGGATGC ACAAGGCGAA GAAATTCAAG CCCAGTGTAT GACGATAGCT
AAATCTGTGA ATATGCGAAT TTTGGGGCCT AATAGCTTGG GGCTCATCTT GCCTTGGATG
CAATTCAATG GTTCGTTTTC TCCCGTTTCA GCCTTAAAAG GCAATATTGC TTTTGTGTCA
CAATCTGCGG CGGTATGTAC CACTATCCTT GATTGGGCTA ATGATAAAGG TATTGGTTTT
TCAGCATTTA TTTCTTTAGG CAATGCAAGT GACATTGATT TTGCTGACTT GCTCGATACC
CTCAGTACCG ATAAACATAC CGATGCGATC TTACTGTATG TCGATACGAT TCGTGATGCG
CGACGTTTTA TGTCCGCCGC TCGCGCAGCG TCTCGCAATC GACGGATCCT CGTCTTAAAA
GGTGGTCGTA CTAAAGCCGG AAGAAAAGCG GCACAAATGC ATACCGGTGG CGATGATACT
TTAGACATCA TTTACGATTC TGCGATTCGC CGTACAGGTA TGCTCCGAGT CAATAACACT
CACGAGCTGT TTGCGGCGGT AGAGACATTG ACCCATTCCG TTCCACTGCG TGGTGAACGC
CTTGCGATTA TTACGAATGG TGGTGGCCCG GCGATTATGG CTGTTGATGC ATTATTAGAG
CGCGGAGGTA AACTTGCCCA GCTTGAAGAT GAGATTTATG AAAAGCTTAA TCAGTCTCTT
CCTCAAAGTT GGTCACATAG TAATCCTATC GATATTGTCG GTGATGCTGA TCATCAGCGC
TATGTCTCCA CCTTAAACAT TTTGTTGGAA AGCGATAACA TTGATGCGAT TTTGATCATG
CATAGCCCTT CTGCAATCGC GCATTCAGAA CAAACCGCTC AAGCACTGGT TGAAGCCGTG
CAAAAGCATC CGCGTGCCAA AAGATTTAAT ATTTTGACCA ACTGGTCTGG TGAATTATCT
GCCAAGCCCG CACGTACTCT TTTCAATCAG GCTGGGATAC CGACTTACCG TACGCCCGAA
AGCGCGGTGA CGGCTTTCAT GCACTTAGTC GAGTACCGAC GAAACCAGAA GCATTTGATG
GAAACTCCGA CCACAACAGA AGTGGTACAT GCTTCAGAGA TGCAAACTGC GAAGTCATGG
ATACATGAAC ACTTAGGTGA ACATGATCAG GTCAATCTCG ATACTCATCA AATTGGCACG
TTGCTTAAAT GCTTTAATTT CAATGTATTG CCAACATGGA TTGCTTCTGA CAGTACAGAA
GCGGTGCATA TAGCCGAGAC TATTGGCTAC CCTGTGGCGG TGAAATTACG CTCCCCTGAC
ATTGCGCATA AATCCGATGT GCAAGGTGTT ATGCTTAACT TGCGTAACCG GATAGAAGTG
GCCAATGCCG CGCAAGCGAT TCTGGATAGA ACTCAACTCT CCTACCCCTC AGCGAATATT
CACGGTTTAT TAGTTCAAGG GATGGCAAAA CTGGCTGGCG GGGAAGAACT TAGGATCAAA
GTCAAAACCG ATGCGACTTT TGGGCCAGTA ATTTTATTAG GACAAGGCGG TTCTGAGTGG
GATGAATCAC TCGATGCCGC TGCCGCGCTC CCCCCTCTCA ACATGACGCT AGCGCGCTAC
TTAATTGTTC GAGCGATACG TAGCGGTAAA ATCCGGCTAC AAAAACTCCC CGTCCCTATT
GATATTGAAG GATTATCTGA ATTTTTAGTC CGTATTTCAC AAATGGTTGT TGAATGCCCA
CAAGTGCATG AGCTGGATAT CCATCCCCTG CTTGTCAACG GCAGCCAGTT TACTATTCTT
GATGCTAATT TGGTGCTACG CCAATTCACT GGCGATGCCC AAAGCCGCCT TGCTATTCGA
CCCTATCCCA CCGAGTTGGA AGAAAGGTGC CAAGCACGTG ATGGAGAGTG GCTTACTGTA
CGCCCCATAT TGCCTGAAGA TGAGCCAAAA CATGCCGCCT TTATCAAGAA AGTATCCAAG
GAAGATCTCT ATAAGCGCTT TTTCTCTGAT GTCGGTGAGT TTAACCATGA AGCTTTAGCA
AACTTAACTC AAATCGATTT TGACCGAGAG ATGGCGTTTG TCGCGGTGAG TGGTGAAGGT
GAGGATTCAG AGATTATTGG CGTTTCTCGA GCGTTAATTA ATCATGAGAA TACCGATGCG
GAATTTGCCA TCTTGATTCG ATCGGATTTG AAAGGAAAAG GGCTAGGTAA GATATTGATG
CGTAAGATTA TTGATTATTG TAAAGCCAAA GGGACGCAGC AAATGTCGGG CATGACCATG
CCTACCAATC GCGGCATGTT AACCCTAGCG CAAAAAATGG GCTTTGCCGT CGATATTCAT
TTTGAGGATG GCACTGCTGA CATGGTTCTG CCATTACGCT AA
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| Protein sequence | MDHLNQLLRP KSVAVIGASV RSFRAGNIVM KNLLQGGFDG AIMPVTPYYP AVCGVLAYKT
ISDLPIVPDI AILCTHASRN VSLFKQLAEK GVRQVIVLSS DMYSLDAQGE EIQAQCMTIA
KSVNMRILGP NSLGLILPWM QFNGSFSPVS ALKGNIAFVS QSAAVCTTIL DWANDKGIGF
SAFISLGNAS DIDFADLLDT LSTDKHTDAI LLYVDTIRDA RRFMSAARAA SRNRRILVLK
GGRTKAGRKA AQMHTGGDDT LDIIYDSAIR RTGMLRVNNT HELFAAVETL THSVPLRGER
LAIITNGGGP AIMAVDALLE RGGKLAQLED EIYEKLNQSL PQSWSHSNPI DIVGDADHQR
YVSTLNILLE SDNIDAILIM HSPSAIAHSE QTAQALVEAV QKHPRAKRFN ILTNWSGELS
AKPARTLFNQ AGIPTYRTPE SAVTAFMHLV EYRRNQKHLM ETPTTTEVVH ASEMQTAKSW
IHEHLGEHDQ VNLDTHQIGT LLKCFNFNVL PTWIASDSTE AVHIAETIGY PVAVKLRSPD
IAHKSDVQGV MLNLRNRIEV ANAAQAILDR TQLSYPSANI HGLLVQGMAK LAGGEELRIK
VKTDATFGPV ILLGQGGSEW DESLDAAAAL PPLNMTLARY LIVRAIRSGK IRLQKLPVPI
DIEGLSEFLV RISQMVVECP QVHELDIHPL LVNGSQFTIL DANLVLRQFT GDAQSRLAIR
PYPTELEERC QARDGEWLTV RPILPEDEPK HAAFIKKVSK EDLYKRFFSD VGEFNHEALA
NLTQIDFDRE MAFVAVSGEG EDSEIIGVSR ALINHENTDA EFAILIRSDL KGKGLGKILM
RKIIDYCKAK GTQQMSGMTM PTNRGMLTLA QKMGFAVDIH FEDGTADMVL PLR
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