Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0451 |
Symbol | fruB |
ID | 5134577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 500591 |
End bp | 501763 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530774 |
Product | bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
Protein accession | YP_001215292 |
Protein GI | 147671509 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAC TCACTACACA AGATATTCAA TTGCAGCAAA ACTTTGCGAA TAAGCAAGCT GCGATTCAAG GACTGGCTCA CGCGTTGACC GCGAAAGGCT TAGTGGCAGA AGGCTATGCG CAAGGTATGC TCAATCGCGA AGCACAGCAT TCCACCTATC TCGGTAATGG GATTGCGATT CCGCATGGCA CAACCGATAC CCGTGAACTG GTTAAACAGA CAGGTGTCAC CGCCATGCAC TTCCCGCAAG GTTTGGATTG GGGAGACGGT AATCTGGTGT ATGTGGCCAT CGGTATCGCC GCAAAATCGG ATGAACATTT GGGCATTCTA AAGCAGCTGA CCAGAGTGCT GTCTGCCGAT GGCGTTGAGC AAGCGCTCCA GCAAGCCAAA ACAGCGCAAC AAATCATTGC CATTATCAAA GGTGAAGCCC AGTTAACCGC AGATTTTGAC GCTTCGTTGA TCCAATTGCA GTTTCCAGCC AGTGATATGG TGCAAATGAG CGCTGTTGCG GGGGGATTGT TGAAAAACAC GGGCTGCGCA GAAAATGAAT TTGTTGCCGA CCTAGTCACT AAAGCACCGA CTCATCTTGG ACGCGGTTTG TGGTTAGTAG CCAGCGATCG CGCAGTAAAA CGGACTGGGA TGTCGATCGT CACTACGGCA AACCATTGTG AATATGAGCA ACAAGCGGTG AAAGCGCTGA TTGCGTTTTC GGTGTGTAAT GACCTCCATC AGCCTCTGCT TAACACCATT ACTCAGTGCG TGTTTGAGCA AAAACAAGAT CAACTCTTGC AGGCCGATGT TCAGCAACTG CTTAATCTGT TTAGCGGCAA CGCTGAGCAA ACAATAGCTG GGGAAACGAT AGCCGCAGAA ACGGTGGCGG AGCCTGATTC TGCTCGCGCT CATACGGCGA CTTTCCGCAT TAAAAATAGC CATGGTTTGC ACGCTCGTCC CGGTGCGATG TTAGTCGCCG AAGCCAAGAA GTTTGAATCT AATATCCGTG TGTCTAACCT GGATGGCGAT GGTCAAGTCG TCAATGCCAA AAGCTTGATG AAAGTGATTG CGCTGGGCGT AAAACACAAT CATCAGTTGC AGTTCACCGC AGAAGGCCCA GATGCAGAAG CCGCGCTGCA AGCGCTAGGC GGGGCGATCA ATGCTGGCTT AGGCGAAGGT TAA
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Protein sequence | MLELTTQDIQ LQQNFANKQA AIQGLAHALT AKGLVAEGYA QGMLNREAQH STYLGNGIAI PHGTTDTREL VKQTGVTAMH FPQGLDWGDG NLVYVAIGIA AKSDEHLGIL KQLTRVLSAD GVEQALQQAK TAQQIIAIIK GEAQLTADFD ASLIQLQFPA SDMVQMSAVA GGLLKNTGCA ENEFVADLVT KAPTHLGRGL WLVASDRAVK RTGMSIVTTA NHCEYEQQAV KALIAFSVCN DLHQPLLNTI TQCVFEQKQD QLLQADVQQL LNLFSGNAEQ TIAGETIAAE TVAEPDSARA HTATFRIKNS HGLHARPGAM LVAEAKKFES NIRVSNLDGD GQVVNAKSLM KVIALGVKHN HQLQFTAEGP DAEAALQALG GAINAGLGEG
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