Gene VC0395_0449 details

Gene Information

• Locus tag: VC0395_0449
• Symbol: fruA-2
• ID: 5134355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: -
• Start bp: 497872
• End bp: 499614
• Gene Length: 1743 bp
• Protein Length: 580 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640530772
• Product: PTS system, fructose-specific IIBC component
• Protein accession: YP_001215290
• Protein GI: 147672353
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1299] Phosphotransferase system, fructose-specific IIC component; [COG1445] Phosphotransferase system fructose-specific component IIB
• TIGRFAM ID: [TIGR00829] PTS system, fructose-specific, IIB component; [TIGR01427] PTS system, fructose subfamily, IIC component

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGATGA AAATAGCCAT TGTAACCGCA TGCCCAAGTG GCGTTGCCAA TAGCATTATT 
GCGGCGGGTT TACTGCAGCA AGCCAGTAAA ACGTTAGAGT GGGAAGCCTA TATCGAATGT 
CACTCAACAG TGATTGCAGG CCACACCTTA AGCGAAGAGG AAATCAATAA AGCCGATCTG 
GTCGTACTGG CCGCTAACGG CGAGATTGAT ATGCAGCGTT TTGTCGGTAA AAAAGTCTAC 
CAAAGCCCTA TTACCGCCTG TACTTCCGAT CCCGTCGGTT ACCTTAAGCA AGCCGCAGAA 
CAAGCGACTG AACTCAGCTC CGAGCAGGCA ACACGCTGTG ACTCCCCCGC CACAGTGCCT 
GTTTCTGCCA AAAAAATCGT CGCCATTACT GCTTGCCCAA CGGGGGTTGC ACACACCTTT 
ATGGCAGCGG AAGCACTAGA AGCGGAAGCG ACACGTCAAG GCCATCAGAT CAAAGTTGAA 
ACGCGTGGTT CTGTCGGTGC TAAAAACCAA CTGACAGAGC AAGAAATTGC TGCCGCCGAT 
CTAGTGATTA TCGCGGCCGA TATTGATGTT CCTCTGGATC GCTTCAATGG TAAAAAACTC 
TATAAAACCA GTACTGGCCT CGCGTTGAAG AAAACCGCGC AGGAGCTCAG TAATGCCTTC 
GCGCAAGCAA AAACTTTCTC AAGCTCTGCC AACAGCGCGA CTAACGAGAA AGCAGAAGAG 
AAAAAAGGCG TGTATAAACA CTTGATGACA GGCGTATCGC ACATGCTGCC TGTCGTGGTC 
GCTGGCGGTC TTATCATCGC GCTCTCTTTC GTATTTGGTA TTGAAGCATT CAAAGAAGAA 
GGCACTTTAG CTGCTGCTTT AATGCAGATT GGTGGAGGTT CAGCATTTGC GCTGATGATT 
CCGGTGCTTG CTGGCTACAT TGCATTTTCT ATTGCCGATC GTCCGGGACT GGCTCCGGGT 
TTAATTGGCG GTATGCTCGC AAGCTCAACG GGCGCCGGTT TCCTTGGCGG TATCGTTGCA 
GGTTTCCTCG CGGGTTACAG CGCCAAATTT ATTGCCGATA AAGTGCAACT GCCTCAATCA 
ATGGCCGCGC TAAAACCGAT TTTGATCATC CCGTTTATTG CCAGCTTATT TACCGGATTA 
GTGATGATTT ACGTCGTGGG CGGCCCCATG TCGAGCATCA TGAGCGGTAT GACCAGCTTC 
CTAAACAACA TGGGTTCAAC CAACGCGATT TTGCTCGGTA TTGTGCTTGG GGCCATGATG 
TGTTTCGACT TAGGTGGGCC AGTGAACAAA GCCGCATACA CCTTCGGCGT CGGCTTACTC 
GCCTCACAAA CTTATGCGCC AATGGCCGCG ATCATGGCGG CAGGTATGGT GCCAGCATTG 
GGTATGGGCT TAGCAACCTT TATCGCGAAA GACAAGTTTG AAGCGGGAGA GCGCGAAGCA 
GGAAAAGCCT CTTTTGTTCT GGGCCTATGC TTTATCTCTG AAGGTGCAAT TCCTTTTGCC 
GCCAAAGATC CAATGCGAGT GATCCCAGCT TGTATGGTCG GTGGAGCCGT GACAGGCGCA 
CTCTCTATGC TATTTGGCGC GAAATTGATG GCGCCACACG GCGGTCTGTT TGTGCTCTTG 
ATCCCGAATG CGATAAGCCC GGTGCTGCTG TACTTGGTCG CGATTGCTGT CGGTACGGCG 
ATTACCGGTT TTGGCTACGC TATGCTGAAA AAGTCGGCAC AAGCCAAAGC GGTCGCGGCT 
TAA 

 

Protein sequence

MKMKIAIVTA CPSGVANSII AAGLLQQASK TLEWEAYIEC HSTVIAGHTL SEEEINKADL 
VVLAANGEID MQRFVGKKVY QSPITACTSD PVGYLKQAAE QATELSSEQA TRCDSPATVP 
VSAKKIVAIT ACPTGVAHTF MAAEALEAEA TRQGHQIKVE TRGSVGAKNQ LTEQEIAAAD 
LVIIAADIDV PLDRFNGKKL YKTSTGLALK KTAQELSNAF AQAKTFSSSA NSATNEKAEE 
KKGVYKHLMT GVSHMLPVVV AGGLIIALSF VFGIEAFKEE GTLAAALMQI GGGSAFALMI 
PVLAGYIAFS IADRPGLAPG LIGGMLASST GAGFLGGIVA GFLAGYSAKF IADKVQLPQS 
MAALKPILII PFIASLFTGL VMIYVVGGPM SSIMSGMTSF LNNMGSTNAI LLGIVLGAMM 
CFDLGGPVNK AAYTFGVGLL ASQTYAPMAA IMAAGMVPAL GMGLATFIAK DKFEAGEREA 
GKASFVLGLC FISEGAIPFA AKDPMRVIPA CMVGGAVTGA LSMLFGAKLM APHGGLFVLL 
IPNAISPVLL YLVAIAVGTA ITGFGYAMLK KSAQAKAVAA