Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0436 |
Symbol | |
ID | 5134768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 484778 |
End bp | 485458 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530759 |
Product | haloacid dehalogenase/epoxide hydrolase family protein |
Protein accession | YP_001215277 |
Protein GI | 147672474 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CCAGAGTAAA GTGTGTCATT TTTGACTGCG AAGGAACCTT AGTAGACAGC GAACGTTTGT GCTGTGAAGC TCTGGTACAA GTGTTTGGCG AACTTGGGGT GGCCTTAAGC TACCAGCAGG TCGCTGAGCA TTTCTCGGGT GGCAAAATCG CCGACATTCT CCATGCGGCT TGCCAACTGG CGAAGATAAC AGCGGATATT GATTTGCTTG AGCAGCGTTA CCGCTCGATT GTCGCGGCAA CGTTTCGGCG CAAACTTTCT CCGATGGGGG GCGCGAGGGC ATTACTCAAT TACTTGAAGC GTAACCAGAT TGAATTTTGT GTGGCGTCAA ACGCGCCACG AGAAAAAATC GCGATGACCC TGACTCTCGC CGGTCTTGAG CACTATTTTG AAGGGCGGAT TTTTTCTGCT TTTGATGCGA ACAGCTGGAA ACCTGAGCCG GATCTCATCC GTTATTGTGC AATGAACATG GGTTTTACAT TGGATGAGTG CATTTATGTT GACGACACAC CGAAGGGCGT TGAAGCAGGA TTAAATGCAG AAGTGCTGAC CTTTCAATTG AGCCCACTGA ATCCCCAACA TCGCAGCCAT TCTCAGCAAG TGATTGTGCT GAGCAATCTA CTTCAACTTG CGGAGTATTT GAGTGGTAGC GTGATGCGCC AATCCGCGTA A
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Protein sequence | MTESRVKCVI FDCEGTLVDS ERLCCEALVQ VFGELGVALS YQQVAEHFSG GKIADILHAA CQLAKITADI DLLEQRYRSI VAATFRRKLS PMGGARALLN YLKRNQIEFC VASNAPREKI AMTLTLAGLE HYFEGRIFSA FDANSWKPEP DLIRYCAMNM GFTLDECIYV DDTPKGVEAG LNAEVLTFQL SPLNPQHRSH SQQVIVLSNL LQLAEYLSGS VMRQSA
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