Gene VC0395_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0403 
Symbol 
ID5134597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp447178 
End bp447810 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content49% 
IMG OID640530726 
Productputative methyltransferase 
Protein accessionYP_001215244 
Protein GI147671721 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00297063 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTACT CTTGGCAGCA TTGCCCGAAT ACAAGAAGTA ATACGGAGGC CATGATGGCA 
CACGACTGGG ATGAGTACGC AGCAAATTGG GAAAAAGACC CAGCGACCCA TGCTTTTGCG 
CAAAGCGTAT TTGAACATCT GACAAAAATC CTCTCTTTGC AGGGAAAGCA TATTTTGGAT 
TTTGGCTGTG GTACAGGCTT GCTAAGTCAG CGGATGTCGC CGTTTGCTCG TGATATTGTT 
GCGCTGGACT CATCAGAAGC CATGATTGAG GAGCTGGATC GCAAGGAACT ACGCAACGTT 
GAGCCTGTGG TGGATTGCTT AACCCGCGGT TTGGTTGCTC AACATCCAGC CTTTCGTAAG 
CAGTTTGATT TGGTCGTTGC CTCATCGGTA TGCGCTTTCT TACCGAATCT TCAAGATGTG 
ACCGATATTA TTTTCACGCT AGTGGATGAA GGCGGGTATT TTGTGCATTT TGATTGGTTA 
GCCGATGGCA AATCGGAAAT AGGCTTGAGC ACGACGGAGA TTGAATCTGT GCTGCGTAAT 
GCGGGGTTCT CTGCCGTGGA GACTCGGGTC GCGTTTGATG TCACTACCGC ACAAGGCACG 
CAACCTGTTG TGGTTGGAAT TGCTCGTAAG TAA
 
Protein sequence
MVYSWQHCPN TRSNTEAMMA HDWDEYAANW EKDPATHAFA QSVFEHLTKI LSLQGKHILD 
FGCGTGLLSQ RMSPFARDIV ALDSSEAMIE ELDRKELRNV EPVVDCLTRG LVAQHPAFRK 
QFDLVVASSV CAFLPNLQDV TDIIFTLVDE GGYFVHFDWL ADGKSEIGLS TTEIESVLRN 
AGFSAVETRV AFDVTTAQGT QPVVVGIARK