| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0373 |
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| Symbol | |
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| ID | 5134330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 409598 |
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| End bp | 411988 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530696 |
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| Product | putative lipase |
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| Protein accession | YP_001215214 |
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| Protein GI | 147671873 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGG TTATTAAGCT CTCCCTACTC TGCTCAGCAC TCTGGTTAGC CGGTTGCGGT
GATGAGACCA ATAGTTCAGG TGCAAGCACT GAGGTGGTAT ACGAATCCTA TATTCAACAA
GCCTTGCAAC GTGATACCAC GATCAAATTT GCGTTAAGTG GCAAAGATGC CAATGTGCCT
CTACCCTCCT TTGCCTTAAT GAATGCTAAG GATGGCACGT TGGAAATTCC GCCAGGAAGC
AATACTTCTG GCTCTAACCC ATTGGTCGCG ATGGGACAAG TGGATGGCTG GCCCATCACT
ATGCCGCTGT TCCTCGATTT TAAAGGTGCA GGTTTAGCCG ATAACATCAT CACATCGGGT
ATTTATCTGT ACGAGTTAAC CGACTCGATG ACCGGTTCAC CGAGTATCAA AGCTTTATTA
ACCAATGGGG TGGATTACAC CGCCGTATCC AGTGCTGCTT CCGATAAGAT TCTCATCATG
CCGACCAAAG CACTCAATGC CTCTTCGGAA TACATTCTGG CGGTCACCTC AGAAGTCTCG
GATGCCAACG GTAATCCGGT GGGGACTTCT GCAAGCTATG CCGCACTAAA ATCCAAAAAC
AAGATTTACA GCGAAGGAGA TATTGCGACG CTACAAAAAG TCACTCAAGG GGTAGAAAAA
ATCTTCCAAC TCAGCGGCGT CGATGAGACT CAAATCGTTT ACTCGACGTG GTTTTCCACC
CAATCGGTGA GCAATACTCT GTTTGCCACG CGCGGTGCGA CCGCATCCGC TTTTGCCAGT
GGCAGCAACC AATTAGAGAC AGTGTGGAAA CAAACAGGCC TTGGGCTCGA TACGGCTTAC
ACCATACAAT TAGGTACACC CGTTGACTTC GCTGCCGCTC TGACAGCGGA TGACAATTTC
AGTACCTATG TTGGTGCAGA CAAAAAAACC GCTATTTTAG GTACTTACAC GGCCAATACC
GTTGATGTAA CCAAAGGCAC AGTCCGTCTA CCTTACTACC TTGAAACTGG CAGTAACTGG
AATACTCAAC CGTTTGAATC GGCGATGCCA AGCCTCGCCA AGATCAAAGC CGCACTGGCA
GACAGTAAAG AGCAATTAAC GATCGGCAGC CAACTGCTTG CCGCGGGGAT TGATACCACC
AAGCTCGCCA CTGATGCGAG TGAACAGCTC AAGCTGATGG GTTTGACATT GACCAAGTCC
GATGGCACTG CATTGGACCC TGAACGCTAC ATCACTCGCT ATTCACCCGT ACCCAAAGTG
AAATCGGTGC AAGATGTGCC ATTTTTACTG TTTACTCCGG CAGGTGCTGC GCCAACTGAT
ATTGTGATTT ATCAACACGG TGTCACCACT GCCAAAGAAA ATGCCTACGC TTTCGCGAAA
AATCTTACAG CTGTGGGACT TGCTGTTATT GCCATTGACT TACCGCTGCA CGGGGAACGT
AGTTTAGACA GCACGCGCTC GGCCAATAGT GATCCCCTTG CTTACATCAA CCTCACCTAC
TTGGCCGTGG CTCGGGATAA CTTACGCCAA AGCATTCTCG ATGTATTGGG ACTGCGAGCA
GCGTTAACCC TGTCTCAGCC TCTTTTCACT GGTACCCGAC TGTCTGGCAT CAATGTAGGT
ACAGGCTCGA AAGTTCGTAT GCTGGGACAT TCATTAGGGG GAATTGTCGG CACTTCTGCG
ATTGCGGAAA GCAACAAGAC CTTAGGATCT ACTGCTGCAG ATGCTATGTA CAGCTTCTCT
GGCGCGGCGA TTCAAAACTC AGGCGGGCAA ATTTCTAACC TACTATTGGG ATCAGCGTTT
TTTGGTCCGA AGATCAAGCA TAACGTTGCA TTAAGCGCTA GCACAGAATA CAAAGGGTTT
GCTGATGCAC AATGTGCCAG CTTAGATGAT TCTGCTTGCT ATAACTTGTT CACTTCCTTG
GCAACCCAAG AGCAGCTGGC CCAAGTCACC TCAGGCTTCC AGATGTTCTC GTATGCGGCG
CAGACCCTAC TCGACACCAT TGATCCTTAC TCTATAGTGA GCACAAAGCT CAATAATGGT
GGGCTGACCA CACCACTTTA CTTCTCAGAA GTGGATGGTG ATAGCGTGGT ACCTAACAAG
GTGAGTAATC CTACTGGCTC GCTGGTTTAT CTCAGCCCTC AGTTTGCCGG CACAGAGCCG
CTGGCTACCT TGCTTGGTTT AACCACAGTC AATGCAGGAC AAACAGCGCC AAACGCAACC
AAAAGCTTTG TTCAGTTCAA CAGCACGGCG AAGCACTCGA CCTTTGTTGC ACCGCAAGAT
GCGGGATATG CGGATCTTGC ACATCATACG GAGATGCAAA CTGAAACCGC TGATTTTCTT
GCTGACGATA GCCTTGGCGC CGTATCTAAT AGCAACTCTG TCTTGAAGTA A
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| Protein sequence | MKQVIKLSLL CSALWLAGCG DETNSSGAST EVVYESYIQQ ALQRDTTIKF ALSGKDANVP
LPSFALMNAK DGTLEIPPGS NTSGSNPLVA MGQVDGWPIT MPLFLDFKGA GLADNIITSG
IYLYELTDSM TGSPSIKALL TNGVDYTAVS SAASDKILIM PTKALNASSE YILAVTSEVS
DANGNPVGTS ASYAALKSKN KIYSEGDIAT LQKVTQGVEK IFQLSGVDET QIVYSTWFST
QSVSNTLFAT RGATASAFAS GSNQLETVWK QTGLGLDTAY TIQLGTPVDF AAALTADDNF
STYVGADKKT AILGTYTANT VDVTKGTVRL PYYLETGSNW NTQPFESAMP SLAKIKAALA
DSKEQLTIGS QLLAAGIDTT KLATDASEQL KLMGLTLTKS DGTALDPERY ITRYSPVPKV
KSVQDVPFLL FTPAGAAPTD IVIYQHGVTT AKENAYAFAK NLTAVGLAVI AIDLPLHGER
SLDSTRSANS DPLAYINLTY LAVARDNLRQ SILDVLGLRA ALTLSQPLFT GTRLSGINVG
TGSKVRMLGH SLGGIVGTSA IAESNKTLGS TAADAMYSFS GAAIQNSGGQ ISNLLLGSAF
FGPKIKHNVA LSASTEYKGF ADAQCASLDD SACYNLFTSL ATQEQLAQVT SGFQMFSYAA
QTLLDTIDPY SIVSTKLNNG GLTTPLYFSE VDGDSVVPNK VSNPTGSLVY LSPQFAGTEP
LATLLGLTTV NAGQTAPNAT KSFVQFNSTA KHSTFVAPQD AGYADLAHHT EMQTETADFL
ADDSLGAVSN SNSVLK
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