| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0372 |
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| Symbol | |
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| ID | 5134406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 407840 |
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| End bp | 409237 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640530695 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215213 |
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| Protein GI | 147671621 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCACA TTAAAGGGAA TTGCCCTTTC AGCCATGAAA GATTGCTGCG TTGGGTGGTC
CCAGTGACGA ATTTGTTGGC TGCAAATAAG GGCGTATCAA CTATTAAAGG GTCACTTATG
TTTCTTTTTC AAAAACAAAA ACCATCGACC AAACCTTCCC ATCAGGACAA TATTGTGCAG
TCCCTATCCG AGCATATTGC TTCGATTGAA TTTGATACCT CAGGTAATGT CATCTCTGCT
AATCCACTTT TTCTCAATGC CGTTGGTTAT CGGTTAGAGG AGCTTACCGG GAAACATCAT
CGTATTTTTT GCTCTCCCGC AGAGTGTCAA TCGCAACAAT ATCAGCAATT TTGGACCTCT
CTTGCTCAAG GTAAGTCGCA TTCTGGTACT TTTATGCGCT ACAAAAAAGA TGGTTCACTT
TTAGTCTTAG AAGCGACCTA TTTCCCCATC AAAACCGATG GGAAAGTGAG TAGTGTGATG
AAAATTGCCA GTGATGTTAC GGAACAATAT CTCCACGCTG AGTCACAACG AGATCTTTTG
ACGGCACTGA ACCAAAATTT TGCAGTGATC GAATTTGAAC CTGATGGCAC GATTATTTCT
GCAAACAGTG CATTTCTCAA AACAATGGGC TATTCACTCG ACCAAATAAA AGGCAAACAC
CATCGCCTGT TCTGCTTTGA TGAGTTCTAT CAGCAACATC CAACCTTTTG GAAAAGCTTG
GCGGCAGGGC AAGCTTATTC TGGTCGGTTC TTACGCAAAA ATAGTTATGG TAGTCAGGTA
TGGATCCAAG CCTCCTACAG TCCGGTCAAA GATCAAAACA ATAAGGTATA TAAAATTGTC
AAGTTCGCCT CAGACATCAC TGCAGAGGTA TTACGTGAAC AGCAAGTAAC AGACGCTGCC
AATATCGCCT ATAGCACCTC AGTAGAAACC TCGCAAGTAG CACAAGGCGG GAACCATGTA
CTGCAAGATT CAGTTCGTTT AGCAGAAAAA ATGGTGGGCA ATATCGAACA ATCACTACAA
CAGATTGAGC AGCTCGTGGT TCTCTCGAAA GATGTCTCTG AAATTGTCAA AACCATCAGT
GGTATCGCTG ACCAAACCAA CTTGCTCGCA TTAAATGCAG CGATAGAAGC GGCGCGAGCG
GGTGAGCAAG GACGCGGTTT TGCGGTGGTT GCCGATGAAG TGCGTCAACT GGCTTCTCGC
ACCTCAAAAG CCACAGAAGA GATCAATCAA GTGGTGAATA AAAACCTCTC CTTAACTGAA
GCGGTAACCA GCTCTATTTC TCAAGTCTCT CAGATTGCCA ATGAAACCAA TGGCCGCATT
GTGGAAGTGT CAACCATCAT GGAACAGATT TACCAAGGTG CAGAAAATGT TTCTTCGGCG
GTCAGCCAAC TCAAATAG
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| Protein sequence | MPHIKGNCPF SHERLLRWVV PVTNLLAANK GVSTIKGSLM FLFQKQKPST KPSHQDNIVQ
SLSEHIASIE FDTSGNVISA NPLFLNAVGY RLEELTGKHH RIFCSPAECQ SQQYQQFWTS
LAQGKSHSGT FMRYKKDGSL LVLEATYFPI KTDGKVSSVM KIASDVTEQY LHAESQRDLL
TALNQNFAVI EFEPDGTIIS ANSAFLKTMG YSLDQIKGKH HRLFCFDEFY QQHPTFWKSL
AAGQAYSGRF LRKNSYGSQV WIQASYSPVK DQNNKVYKIV KFASDITAEV LREQQVTDAA
NIAYSTSVET SQVAQGGNHV LQDSVRLAEK MVGNIEQSLQ QIEQLVVLSK DVSEIVKTIS
GIADQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRQLASR TSKATEEINQ VVNKNLSLTE
AVTSSISQVS QIANETNGRI VEVSTIMEQI YQGAENVSSA VSQLK
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