Gene VC0395_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0348 
Symbol 
ID5135015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp381665 
End bp382048 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content48% 
IMG OID640530671 
Productglyoxylase I family protein 
Protein accessionYP_001215189 
Protein GI147671677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAC GCATTCATCA TGCTGCGATC ATTTGTTCGG ATTATCCACG CTCTAAGGCG 
TTTTATACGG AAATTTTAGG CTTACGCGTA TTGGCCGAAA ACTACCGTGC AGCGCGAGAT
TCTTACAAGC TGGATTTAGC CCTGCCCGAT GGTTCGCAGA TTGAGTTGTT CTCTTTTCCT
AAAGCACCTG AACGGCCAAG TTTTCCGGAG GCGCAAGGGC TGCGCCATTT GGCGTTTGTG
GTCGATGATG TGGCAGAAAT AAAAGCTCAA CTCGAGCAAC AAGGCGTAAG TGTGGAGCCA
ATCCGCATTG ATGAATACAC TGGCAAAGCC TACACCTTTT TTGCTGATCC GGATGGGTTG
CCACTTGAGT TGTATCAGGC TTAA
 
Protein sequence
MLKRIHHAAI ICSDYPRSKA FYTEILGLRV LAENYRAARD SYKLDLALPD GSQIELFSFP 
KAPERPSFPE AQGLRHLAFV VDDVAEIKAQ LEQQGVSVEP IRIDEYTGKA YTFFADPDGL
PLELYQA