Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0347 |
Symbol | |
ID | 5134967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 380175 |
End bp | 381587 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530670 |
Product | hypothetical protein |
Protein accession | YP_001215188 |
Protein GI | 147672334 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTACCG TTACTACACC TCAACCGACG GCGGCTGCGC GTCGTAAGAC CCTCTATTTT CTCACTTGGC GTTGGCATTT TTATGCGGGC CTGTTTGTGG TGCCTTTTAT GTTGATGTTG GCGCTGACGG GCTTAGTCAT GTTGTTTGAT GATGAAATTG AACAAGCTCG CTATGCCGAG GTATTAAACG TTACACCACA AGCGCAGGTC ATGCCTGTTT CTCAGCAGCT TGCGGCAGTA CAAAAGGCGT ATCCAGAAGC GCAAGTTACC CAGTTTATTC CTGCGCTTCA GCCGGATTTA GCCAACCGTT TTTCTGTACT GTTTAGCGAT GGTTCAACCC AATTTGTCAC GGTTAATCCG TATAGCGCTG TGGTTCTGGG CACTATTGAT CGTAGCGAAA GCTGGTATGA ATGGGCGAAC AGCATTCACG GCACCTTATT GATTGGCGAT TGGGGAGATT ATTTGATTGA AGTCGCGGCG AGCTTGGGGA TGATTTTACT GGTGAGTGGT ATCTACTTAT GGTTGCCGCT TGATAACGCG CGTAAAGCGG GGTTTCTCAA AATCCGAGTG GGCAGTGGTG CGCGAATTTT CTGGCGTGAC CTGCACGCAA ATTTAGGTGG CATGCTGTCC TTAGTACTGC TGTTTTTCCT GATTTCCGGT CTTTCGTGGG CGGGCATTTG GGGCGGGAAA CTGGTGCAGG CATGGAATAC CTTCCCGACG TATTACACTT GGGGAGAAAA ACCGCAATCG GTACTCACGC ATGCGGATTT AAACCATGGC TCAGAAAAAG AGATGCCTTG GAACTTAGAG CAAACGCCAG TACCGCAATC GCATCATCAT GGGGGTGAGC ATGAAATGGT TGCGGTTAAT CCTCAATTCG GTATCGACCA AGTGATCGCT CAGGCCAAGG CGCTCGGTTT TACGCAGTAC CGCGTTGCTT TTCCGCGTGG GGAAACGGGC GTGTATACCG TTTCTGCCAA TACCATGGCG GGTGATATTG TCGATCCACG TGATGATCGC ACTGCGCATT TTGACCAATA TTCTGGTGCG TTACTCACCG AGGTCACTTG GCAAGATTAT TCGCCATTTG CCAAAGCAAT GGCGGCGGGG ATTTCGCTAC ACCAAGGCGA TCTGAGTGTA TGGAACAAAA TAGCCAACGT GCTGTTTTGT CTCGCTTTCA TTCTGATCTC TGTCACAGGT GTGGTGATGT GGTGGCTGCG CCGCCCGACC GGTCAAGCTC GGCTAGGTGT TCCGCCACGT TTTGAGCAAG ATGGAGTATG GAAAGCAGGC TTAGCCACGT TACTGGTGAT TGGTGTGGCA TTCCCACTGG CGGGAGCGAC GATAGTGTTG GCTTTGCTGC TTGATGGGTT ACTGGTGAGT CGTATTGCTA AGCTGAAAAT CGCTTTCAGT TAA
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Protein sequence | MSTVTTPQPT AAARRKTLYF LTWRWHFYAG LFVVPFMLML ALTGLVMLFD DEIEQARYAE VLNVTPQAQV MPVSQQLAAV QKAYPEAQVT QFIPALQPDL ANRFSVLFSD GSTQFVTVNP YSAVVLGTID RSESWYEWAN SIHGTLLIGD WGDYLIEVAA SLGMILLVSG IYLWLPLDNA RKAGFLKIRV GSGARIFWRD LHANLGGMLS LVLLFFLISG LSWAGIWGGK LVQAWNTFPT YYTWGEKPQS VLTHADLNHG SEKEMPWNLE QTPVPQSHHH GGEHEMVAVN PQFGIDQVIA QAKALGFTQY RVAFPRGETG VYTVSANTMA GDIVDPRDDR TAHFDQYSGA LLTEVTWQDY SPFAKAMAAG ISLHQGDLSV WNKIANVLFC LAFILISVTG VVMWWLRRPT GQARLGVPPR FEQDGVWKAG LATLLVIGVA FPLAGATIVL ALLLDGLLVS RIAKLKIAFS
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