Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0339 |
Symbol | gnd |
ID | 5134574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 371211 |
End bp | 372659 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530662 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | YP_001215180 |
Protein GI | 147671542 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00114124 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGTG ATATCGGTGT AATCGGCCTT GCAGTAATGG GCCAGAACCT GATCCTCAAC ATGAACGACC ACGGCTTCAA AGTGGTGGCA CACAACCGTA CCGCGGCTAA AGTGGACGAG TTTCTAGAAG GCCCAGCAAA AGGCACTAAC ATTGTTGGCG CTTACACTCT GCAAGAGCTG GTCGATAAAC TGGCGACGCC ACGCAAAGTG ATGCTGATGG TTCGTGCAGG TCAAGTGGTT GATGACTTCA TCGAGCAACT GGTTCCACTG CTCGACAAAG GTGACATCAT CATTGATGGT GGTAACACCA ACTTCCCTGA TACTAACCGC CGTGTCAAAG CGCTGCGTGA AAAAGGCATT CACTTCATCG GTACGGGTGT TTCTGGTGGT GAAGAAGGTG CACGTTTCGG ACCTTCGATC ATGCCGGGTG GCGCACCTGA AGCATGGGAA GCGGTAAAAC CGATTTTCCA AGGCATTTCT GCAAAAACTG ACGCTGGTGA GCCTTGCTGT GACTGGGTGG GCAACGATGG TGCCGGTCAC TTCGTGAAAA TGGTTCACAA CGGTATCGAA TACGGCGACA TGCAGCTTAT CACTGAAGCT TACCAGTTCA TGAAAGATGG TCTGGGAATG TCGGCCGATG AAATGCAAGC CGTATTTGCT GACTGGAACA AAACTGAGCT AGACAGCTAC TTGGTTGAGA TCACCGCTGA CATCCTTGGC TACAAAGATG AAGATGGTGA AGCGTTGGTT GAGAAGATCC TCGATACTGC TGGCCAAAAA GGCACAGGTA AATGGACGGG TATCAACGCG CTGGACATGG GCATCCCACT GACTCTGATC ACCGAATCCG TGTTCTCTCG CTGCCTATCC GCACTGAAAG ATCAACGTGT TGAAGCTGAA AAACTGTTTG GTAAAACCAA AACTCAAGTC GAAGGTGACA AACAAGTTTG GGTTGATGCG CTGCGTCAAG CGCTGCTGGC TTCAAAAATC ATCTCTTACG CACAAGGCTT TATGCTGATG CGTGAAGCAT CGAACGAGAA TGGTTGGAAC CTGAACTACG GTAACGTGGC TCTGATGTGG CGTGGTGGTT GTATCATCCG CTCTGCGTTC CTAGGCAACA TCCGTGATGC GTTTGAAAAG AACCCAGAAC TGGCGTTCTT AGGTTCTGAT GCGTACTTCA AAGGTATTCT GAACAACTGT CTGGCTGCAT GGCGTAAAGT GGCAGCGAAG TCGCTGGAAG TCGGCATTCC AATGCCATGT ACGACTTCAG CACTGACCTT CCTTGATGGT TACACTACGG CTCGCCTGCC AGCGAACCTG CTGCAAGCAC AGCGTGATTA CTTTGGTGCG CACACTTATG AGCGTATCGA TCGTCCGCGT GGTGAGTTCT TCCACACTAA CTGGACGGGT ACAGGCGGTA ATACTGCGTC TACTACTTAC GACGTGTAA
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Protein sequence | MKGDIGVIGL AVMGQNLILN MNDHGFKVVA HNRTAAKVDE FLEGPAKGTN IVGAYTLQEL VDKLATPRKV MLMVRAGQVV DDFIEQLVPL LDKGDIIIDG GNTNFPDTNR RVKALREKGI HFIGTGVSGG EEGARFGPSI MPGGAPEAWE AVKPIFQGIS AKTDAGEPCC DWVGNDGAGH FVKMVHNGIE YGDMQLITEA YQFMKDGLGM SADEMQAVFA DWNKTELDSY LVEITADILG YKDEDGEALV EKILDTAGQK GTGKWTGINA LDMGIPLTLI TESVFSRCLS ALKDQRVEAE KLFGKTKTQV EGDKQVWVDA LRQALLASKI ISYAQGFMLM REASNENGWN LNYGNVALMW RGGCIIRSAF LGNIRDAFEK NPELAFLGSD AYFKGILNNC LAAWRKVAAK SLEVGIPMPC TTSALTFLDG YTTARLPANL LQAQRDYFGA HTYERIDRPR GEFFHTNWTG TGGNTASTTY DV
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