Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0315 |
Symbol | |
ID | 5134939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 346656 |
End bp | 348644 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530638 |
Product | hypothetical protein |
Protein accession | YP_001215156 |
Protein GI | 147672177 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0633] Ferredoxin [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [COG3217] Uncharacterized Fe-S protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCTATG ATGTTGCGCA AATAACTCCG TCGTACTCGA CGCTGCAACA GTTTTGGCTA GATTCTTCCA TCCCAATCAT AGCGTTTGTC TATGCTCATG AGGATGCGCT CTGTGGCCGC TTAGCGGCAA ATCCAAGAAA TGTGGGTATG ACAACAACCA AAGGAAGCAC CATGTCGTCT GGACTCTTAT CTCAAATCAA TGTCTTTCCA GTGAAATCGT TAGGTGGGCT GGCGCTGTCG TCCGCTTGGG TAGAAAAGCA AGGCTTAACC TTTGATCGTC GTTTTATGTT GGCACTGTCT GATGGAAGTA TGGTGACGGC GCGTAAATTT CCGCAAATGG TGCTGATCAA AACCGCGCTG CGTCATGATG GTGTGCTGTT TTCTGCACAA GGTCATCCCT CGCTTACCAT CCGTTATGCA GATTTCAAGT TGCAACCGGT ACCCGCGCAA GTTTGGGCGG ATAATTTCAC CGCGTACACC ACCACCGATG AAGCAGACGA TTGGTTTAGT ACGGTATTGG GGATTCGTGT TGAGCTCTTA TACAGCGGCG AGCAATCCAA TCGTGTACGT GAAAAAGTGG GTCACAATGT CAGCTTTGCC GATGGTTATC CGCTGTTGGT GATAAGCCAA GCGTCGTTGG ATGAACTCAA TCGCCGCAGC CCTGAGTTTC ATTCAATGGA TCAATTTCGT ACCAACTTAG TCGTTTCTGG TACTGAACCG TTCGCCGAAG ACAGCTGGAA GCGTATCCGT ATCGGTGAGG TGGAGTTTGA AGCCGTCAAA CCTTGTGAAC GCTGCATTTT AACCACGGTT GAAGTGAAGA AAGGGGCGTT TAGGCCAACC AAAGAGCCGC TGCGTACACT CTCACAATTT CGTGCTAATG AGCGCGGTGG CGTGTTTTTC GGGCAAAACT TGGTTGCCAA AAATGAAGGA ATGATTCGAG CGGGCGATCC GATTGAAGTG TTGGAATATA AAGAGAAAGA AGTTTACCCA GACCAAGGGG CCAGCCACTT CACACTGACT TGTGTTGAGC GCGAAGAGAT CGCCCGTGAT TTCGTGACTT TCTGGCTAGA GCCTGCCCAA GGCATCGCAC CTCAGTATCT ACCGGGGCAA TATCTGCCAA TTGAAATGGT GATTGAGGGT GAGCCTGTGC AGCGTTACTA CACGCTTTCC TCTAGCCCAT CGCGTCCGGG ACGTTTAGCG ATTTCGGTCA AGCGCATTGA TGGCGGGCGA GTTTCTAATT GGTTGCAAGA GAATTTGCAG ATTGGCACGA CCTTGACCGC GCAGCATCCT ACTGGGCATT TCCATCTGGA TACCACAGCG CCACAGCCTT TACTGCTGCT TTCGGCAGGC AGTGGTGTCA CTCCTATGCT GTCTATGTTG CGTTATCTGG CGGACCATAA CCAACTCGAT GATGTGGTGT TTTATCATCA ATGCCGAAGT GAGCAGGATA TACCTTGCCG AGCGGAACTG GATGCGTTGG CAAAAAAACA TACTGGGCTG ACGCTCATCT ATGCATTAAC CCAACCCTCG GCTGAGTGGC AAGGTGAGCA TGGCCGTTTA GCTTTGTCGC ACATTAAGCG CATTCCTGAC CTTCCCGCTC GCCAAGTGTT TGTGTGTGGC CCTGATGGCT TTATGCAAAA AGCTAAGAAT TTGCTGCTCA AACAAGGGGT AGCCGAATCG GCTTATCATC AGGAAGCTTT CGGTGCGGTG CACGTAGCGC CGCGAGAGAA GAAAGATGTG AAACTCAGTT TCAATGGTAT TCAAGTCTCT GCGGATAATC AGAAAACCTT GCTGGAGCAT GCCGAAGACG CTGGTGTGAG AATACCCAAT AGCTGCCGTG CGGGCATTTG TGGAGCGTGT AAAGTGAAAG TAAAGTCAGG TTTACTGGAG CAGCCTAAAG TTCCTGCTTT GATGGATCAT GAACGCTTGA TGGGCATGGC TTTGGCTTGC TGCTCGGTCG CCGACACGGA TCTGGATGTC GAGTTTTAG
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Protein sequence | MFYDVAQITP SYSTLQQFWL DSSIPIIAFV YAHEDALCGR LAANPRNVGM TTTKGSTMSS GLLSQINVFP VKSLGGLALS SAWVEKQGLT FDRRFMLALS DGSMVTARKF PQMVLIKTAL RHDGVLFSAQ GHPSLTIRYA DFKLQPVPAQ VWADNFTAYT TTDEADDWFS TVLGIRVELL YSGEQSNRVR EKVGHNVSFA DGYPLLVISQ ASLDELNRRS PEFHSMDQFR TNLVVSGTEP FAEDSWKRIR IGEVEFEAVK PCERCILTTV EVKKGAFRPT KEPLRTLSQF RANERGGVFF GQNLVAKNEG MIRAGDPIEV LEYKEKEVYP DQGASHFTLT CVEREEIARD FVTFWLEPAQ GIAPQYLPGQ YLPIEMVIEG EPVQRYYTLS SSPSRPGRLA ISVKRIDGGR VSNWLQENLQ IGTTLTAQHP TGHFHLDTTA PQPLLLLSAG SGVTPMLSML RYLADHNQLD DVVFYHQCRS EQDIPCRAEL DALAKKHTGL TLIYALTQPS AEWQGEHGRL ALSHIKRIPD LPARQVFVCG PDGFMQKAKN LLLKQGVAES AYHQEAFGAV HVAPREKKDV KLSFNGIQVS ADNQKTLLEH AEDAGVRIPN SCRAGICGAC KVKVKSGLLE QPKVPALMDH ERLMGMALAC CSVADTDLDV EF
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