Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0298 |
Symbol | |
ID | 5134407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 332259 |
End bp | 332747 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530621 |
Product | acyl-CoA thioester hydrolase-related protein |
Protein accession | YP_001215139 |
Protein GI | 147671854 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.22 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTG GCAAACGAGA GATCACATTA CGTTTTCTGG CAGAGCCGGG AGATGTCAAT TTTGGTGGCA AAGTGCATGG TGGCGCAGTA ATGAAATGGA TTGACCTTGC GGCGTATGCT TGTGCTGCGG CTTGGAGTGG TAAATATTGC ATCACGGCTT ATGCTGGTGG CATTCGCTTT GTCGCTCCAA TTCATGTCGG TAACTTGGTT GAAGTGAATG CCAAGGTGAT TTATACCGGA AAAACCTCCA TGCACATCGC GATTGATGTG CAGGCGAGCG ATCCTAAGTT CCTGAAAAAT CATCTCACGA CTCATTGCAT TGTGATTATG GTCGCCGTGG ATGAAGCGGG CAAACCGTCT CCTGTGCCCG AATGGATTCC GCAAACTCAG GAAGATCAGG AATTACGCGC TTCGGCGATC CGCTTAATGA ACATGCGCAC CGAAATTGGT GAAGAGATGG AAGCGCACGT GAAATATTTG AAAAATTAA
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Protein sequence | MSSGKREITL RFLAEPGDVN FGGKVHGGAV MKWIDLAAYA CAAAWSGKYC ITAYAGGIRF VAPIHVGNLV EVNAKVIYTG KTSMHIAIDV QASDPKFLKN HLTTHCIVIM VAVDEAGKPS PVPEWIPQTQ EDQELRASAI RLMNMRTEIG EEMEAHVKYL KN
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