Gene VC0395_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0298 
Symbol 
ID5134407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp332259 
End bp332747 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content48% 
IMG OID640530621 
Productacyl-CoA thioester hydrolase-related protein 
Protein accessionYP_001215139 
Protein GI147671854 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.22 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTG GCAAACGAGA GATCACATTA CGTTTTCTGG CAGAGCCGGG AGATGTCAAT 
TTTGGTGGCA AAGTGCATGG TGGCGCAGTA ATGAAATGGA TTGACCTTGC GGCGTATGCT
TGTGCTGCGG CTTGGAGTGG TAAATATTGC ATCACGGCTT ATGCTGGTGG CATTCGCTTT
GTCGCTCCAA TTCATGTCGG TAACTTGGTT GAAGTGAATG CCAAGGTGAT TTATACCGGA
AAAACCTCCA TGCACATCGC GATTGATGTG CAGGCGAGCG ATCCTAAGTT CCTGAAAAAT
CATCTCACGA CTCATTGCAT TGTGATTATG GTCGCCGTGG ATGAAGCGGG CAAACCGTCT
CCTGTGCCCG AATGGATTCC GCAAACTCAG GAAGATCAGG AATTACGCGC TTCGGCGATC
CGCTTAATGA ACATGCGCAC CGAAATTGGT GAAGAGATGG AAGCGCACGT GAAATATTTG
AAAAATTAA
 
Protein sequence
MSSGKREITL RFLAEPGDVN FGGKVHGGAV MKWIDLAAYA CAAAWSGKYC ITAYAGGIRF 
VAPIHVGNLV EVNAKVIYTG KTSMHIAIDV QASDPKFLKN HLTTHCIVIM VAVDEAGKPS
PVPEWIPQTQ EDQELRASAI RLMNMRTEIG EEMEAHVKYL KN