| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0263 |
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| Symbol | |
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| ID | 5134979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 300878 |
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| End bp | 303238 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530586 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215104 |
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| Protein GI | 147672373 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTC AGCATCTGAG TTTTGAGCAG CTCTACCAAG TCGCAAAACT GGAAAAGCTA
GAGTGTAAGT CAACCAAAGA ACTTGCACCG ATCGATGAGA TCGTTGGACA AGAGCGAGCG
CAGAAGGCGG TCGAGTTTGC GATGTCAATC AAAGAGAAGG GATACAACAT CTACGCGATT
GGCCGCAATG GGCTAGGCAA GCGTACTATG ATTTTGCGTT ATCTCAGCCG CCATCAACAC
GATGTCAATA AACTGTATGA CTGGTGTTAT GTAGCGAATT TTGAGGATGT GCGCGTACCT
AAAGTGCTGA AATTACCCTG TGGGATAGGC ATTCAATTTC GTCAAGATAT TGAAAAACTG
ATGACCAAAC TGGTCACGGC TATCCCATTG GCATTCGATA ATGAAATCTA CTTCAGCCGT
GCTGAAAAGT TAAAAAACCA GCTTGCACAA AAGCAAGAAA GTGAACTGGA AAGCATCACT
CGCACCGCAA AAGAGCGGGG AGTGAGTTTA ACCTTGACTC CTCAAGGGGA GTATCAATTT
GTCGCTCTAA ACGGTGAGGA GATGCACACG GAAGAGACGT TTGATGCGCT CTCTAAACGT
GAGCAAGAGC AGTTCAGTAA TACGATTGAT GAGTTGGAAG TCAGTTTGCG CAATATGGTG
CGTCAGTTGA CCGAGTGGGA AGAGTCATAC AGTGAGAAAA TCAAAAAACT GAATGATGAG
GTCACTTTAG ATGTGATTGC CCACTTTATT AAAAAACTGA AGCTTGATTA CAGTAAGTAC
CCAGAAATCA AGGCGTATTT GACCGAGCTG CAAAAAGATA TTGTGGAAAA TGTCGAGATT
TTTCTTGATG AAGGCGGTGA CCAAGGTGAG CTTGCGAATG CGTCTTTGGA TAAAAAAATG
CCACGCCGTT ATAAAGTGAA CGTGCTGGTT AGTCGCAATG CTGAAGAGTT TCCCATCGTG
GTTGAGGAGA GCCCAAACTA CCACTCTCTA TTTGGCTACA TTGAAACTGC GACCTACAAA
GGCACGGTGT TTACCGATTT CTCTCTGATC CGTCCCGGCA GTTTGCACAA AGCCAATGGT
GGTGTGCTGC TCATGGATGC GGTAAAAGTA CTCGAACAGC CTTATGTGTG GGATGGATTG
AAGCGTGCGC TGCGTTCGCG TCAGCTCAGT TTCACTTCAT TGGAAAAAGA AGTCACACTC
ACTGGCACAG TTTCGCTCGA TCCCGAGCCC ATCCCGCTCG ATGTGAAAAT TATCCTGTTT
GGTGACTACC GCACCTATGA ATTGCTGGCG CATTATGATC CCGAATTCAG TGAACTGTTT
CGCGTGACAG CAGACTTTGC GGATGAAATG CCGCGTGATG CCGATTCAGA GCTGCACTAT
GCACGCTTTA TTTCCAGTAT TGTGCATGAT GCCAATATGC TGCACTGTGA CCGTAAAGCC
ATCGCGCGCA TTATCGAGCA CAGTTCGCGC ACCACGGGCG ATCAAACCAA ACTGTCGTTA
CACTCGGCCC ATATTGCCAA TTTGCTGCGT GAATCTAACT ATGTGGCGAA ACAGGCCAAT
GCGAATTTGA TCCGTCAAAG CCATGTTGAG GAGGCATTGC GTAACCAAGA ACTGCGCGTG
AACCGCCTAC AACAGAGCAT GATGGAAACC TTCGTCAATG GCACCACGCT GATTCAAACT
GAAGGGGTGG CTATAGGGCA AGTGAATGCG TTGTCGGTGT TGGCAACCAG CGATCACGCG
TTTGGTATGC CAAATCGAAT CACGGCCACA ACGTCATACG GTGAGGGAGA GATCATTGAT
ATTGAACGCA ATGTCGATCT TGGTGGCAGT ATTCACTCCA AAGGGGTGAT GATTTTGTCT
GCGTACCTCA GTTCGGTGTT TGGGCGCACC GCACGTATTC CGTTGACCAC TACCATAACC
TTTGAGCAAT CCTATGGTGG GGTGGATGGC GACAGTGCGA GCATGGCGGA ATTCTGTGCG
ATTGTTTCTG CGTTTTCGAA ACAGCCGAAT CGACAAGATA TCGCGATTAC CGGATCCATG
AACCAGTTTG GCGAATCGCA GCCGATTGGC GGCTTAAATG AGAAGATCGA AGGCTTCTTT
GATGTGTGTA CCATCAAAGG ACGCAAAGAT ACCCAAGGGG TGATCATTCC ACGCTCTAAT
ATGCATAACC TAATGCTGCG CGCTGATGTT GTGAAAGCGG TGGAAAAAGG TGAATTCCAT
ATCTGGGCGA TTGATCATGT GACCGAAGCG ATCGAGATTT TCACTGGCAA ACCGGCTGGC
GTCGCAACTG ATGATGGCAG CTACCCGGTG GACACCGTAT TTGGTCTTGC TCAAGCCAAA
CTCAACGCAT TACGTAAATA A
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| Protein sequence | MAIQHLSFEQ LYQVAKLEKL ECKSTKELAP IDEIVGQERA QKAVEFAMSI KEKGYNIYAI
GRNGLGKRTM ILRYLSRHQH DVNKLYDWCY VANFEDVRVP KVLKLPCGIG IQFRQDIEKL
MTKLVTAIPL AFDNEIYFSR AEKLKNQLAQ KQESELESIT RTAKERGVSL TLTPQGEYQF
VALNGEEMHT EETFDALSKR EQEQFSNTID ELEVSLRNMV RQLTEWEESY SEKIKKLNDE
VTLDVIAHFI KKLKLDYSKY PEIKAYLTEL QKDIVENVEI FLDEGGDQGE LANASLDKKM
PRRYKVNVLV SRNAEEFPIV VEESPNYHSL FGYIETATYK GTVFTDFSLI RPGSLHKANG
GVLLMDAVKV LEQPYVWDGL KRALRSRQLS FTSLEKEVTL TGTVSLDPEP IPLDVKIILF
GDYRTYELLA HYDPEFSELF RVTADFADEM PRDADSELHY ARFISSIVHD ANMLHCDRKA
IARIIEHSSR TTGDQTKLSL HSAHIANLLR ESNYVAKQAN ANLIRQSHVE EALRNQELRV
NRLQQSMMET FVNGTTLIQT EGVAIGQVNA LSVLATSDHA FGMPNRITAT TSYGEGEIID
IERNVDLGGS IHSKGVMILS AYLSSVFGRT ARIPLTTTIT FEQSYGGVDG DSASMAEFCA
IVSAFSKQPN RQDIAITGSM NQFGESQPIG GLNEKIEGFF DVCTIKGRKD TQGVIIPRSN
MHNLMLRADV VKAVEKGEFH IWAIDHVTEA IEIFTGKPAG VATDDGSYPV DTVFGLAQAK
LNALRK
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