Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0196 |
Symbol | mtlA |
ID | 5134397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 228219 |
End bp | 230168 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530519 |
Product | PTS system, mannitol-specific IIABC component |
Protein accession | YP_001215037 |
Protein GI | 147671594 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAT CAGACGCCAA GGTCAAGATA CAAAATTTTG GCCGTTTCTT ATCAAACATG GTTATGCCGA ATATTGGCGC TTTTATTGCG TGGGGCTTTA TTACTGCGCT TTTTATTCCA ACAGGCTGGG TACCCAATGA GACGTTAGCC TCTTTGGTTG GGCCTATGAT TACCTACTTA TTGCCACTGT TGATCGGTTA TACCGGCGGT AAACTGGCAG GTGGCGAGCG CGGTGCGGTA GTGGGTGCCA TCACCACGAT GGGCGTGATT GTCGGTACCG ACATTCCCAT GTTCATGGGC GCGATGATCG TCGGTCCTAT GGGTGGCTGG GCAATTAAGG CGTTCGATAA AAAAATCGAT GGTAAAGTGC GCAGTGGCTT TGAAATGTTG GTCAACAATT TTTCTGCCGG CATTATCGGT ATGCTATGTG CCATCATCGC TTTCTTCCTG ATCGGCCCAT TTGTGAAAGT GCTGTCAGGC GCATTAGCGG CTGGAGTTAA CTTCCTCGTG ACCGCTCACC TACTCCCTCT GACGTCCATT TTTGTTGAGC CAGCCAAAAT TTTGTTCCTC AACAACGCGA TTAACCACGG TATTTTCTCA CCGCTGGGCA TTCAGCAAGC CAGTGAAACA GGTCAATCTA TTTTCTTCTT AATTGAGGCC AACCCAGGTC CTGGCCTTGG TATTTTGCTG GCGTACATGG TGTTTGGTAA GGGGACAGCT CGCCAAACCG CGGGTGGCGC GACCATCATT CACTTCTTTG GTGGTATTCA CGAAATCTAT TTCCCTTACA TCCTAATGAA TCCACGCCTG ATTTTGGCGG CGATTGCGGG CGGTATGACC GGTGTGTTTA CGCTCACCGT ATTTAATGCT GGTCTGGTAT CTCCAGCATC TCCGGGCTCT ATTTTCGCGG TACTGCTGAT GACTAATAAG GGCTCAATCT TAGGTGTAGT GTGTTCCATC TTTGCAGCGG CAGCGGTTTC TTTTACCGTC GCAGCGCTAC TGATGAAAGC ACAAACTTCA ACCGAGCAAG ATGGCGATAA AGACGCGTTG GTGAAAGCCA CCTCGATAAT GCAAGAGATG AAAGCGGGTT CAAAAGGTCA AGCGGCACCG ACGGCGACCC AAAGCAAAAA AATCGACATG GCGAATGTAC AAAGCATTAT TGTCGCTTGT GATGCGGGTA TGGGCTCTAG TGCCATGGGT GCCAGCATGC TACGTAAAAA AATTCAGGAA GTCGGTTTGC CCGTTACGGT AACGAATATG GCCATCAACT CACTCCCTGC TCATGTGGAT ATGGTGATCA CCCACCAAGA TTTGACGGAC CGTGCACGTC AACACGCGCC GAATGCCGAG CATATTTCAC TCAATAATTT CCTAGATAGC GCGTTGTACA ACCAGTTAGT GACTCAACTT CTGGCCGCAA AGCGCCAAGC GGCCAATGAT AGTCAGCTGA TCAAGCCTTC GATTTTGGCC GCTAACGATG ACCGCTATGA AGTACAGCAG CCAAGCGTAT TCCAACTGCA AAAGGAGAAC ATTCACCTTG GCCTGAACGC CAAAAATAAA GAGGAGGCGA TTCGCTTCGC GGGTAATAAA CTAGTTGAAC TGGGTTACGT CCACCCAGAG TACGTCGATG CCATGTTCGA GCGTGAAAAG CTGGTTTCAA CCTACCTTGG TGAGTCCATT GCCGTACCGC ACGGTACTGT GGATGCCAAA GATCGCGTGA TTAAAACCGG CATTGTGATT TGCCAATACC CACAAGGCGT CGCTTTTAGT GAAGACAGCG GCGATGTCGC CAAACTCGTG ATTGGTATCG CTGCCAAGAA TGATGAACAT ATTCAAGTCA TTACCACCAT TACCAATGCC CTCGATGACC CAAATGCTAT CGATAAACTC ACCTCCACCA AGGATGTGAG TGATGTATTG AGCATTTTGG CCACCAGCCA AGCGGCATAA
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Protein sequence | MISSDAKVKI QNFGRFLSNM VMPNIGAFIA WGFITALFIP TGWVPNETLA SLVGPMITYL LPLLIGYTGG KLAGGERGAV VGAITTMGVI VGTDIPMFMG AMIVGPMGGW AIKAFDKKID GKVRSGFEML VNNFSAGIIG MLCAIIAFFL IGPFVKVLSG ALAAGVNFLV TAHLLPLTSI FVEPAKILFL NNAINHGIFS PLGIQQASET GQSIFFLIEA NPGPGLGILL AYMVFGKGTA RQTAGGATII HFFGGIHEIY FPYILMNPRL ILAAIAGGMT GVFTLTVFNA GLVSPASPGS IFAVLLMTNK GSILGVVCSI FAAAAVSFTV AALLMKAQTS TEQDGDKDAL VKATSIMQEM KAGSKGQAAP TATQSKKIDM ANVQSIIVAC DAGMGSSAMG ASMLRKKIQE VGLPVTVTNM AINSLPAHVD MVITHQDLTD RARQHAPNAE HISLNNFLDS ALYNQLVTQL LAAKRQAAND SQLIKPSILA ANDDRYEVQQ PSVFQLQKEN IHLGLNAKNK EEAIRFAGNK LVELGYVHPE YVDAMFEREK LVSTYLGESI AVPHGTVDAK DRVIKTGIVI CQYPQGVAFS EDSGDVAKLV IGIAAKNDEH IQVITTITNA LDDPNAIDKL TSTKDVSDVL SILATSQAA
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