| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0171 |
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| Symbol | putP |
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| ID | 5134262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 202270 |
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| End bp | 203760 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530494 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001215012 |
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| Protein GI | 147672079 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA GCTTCGCTAT TACAACCACC TTTATCGTCT ACCTCATTTT GATGTTGGCG
ATTGGGGTTT ACGCTTATCA GCGAACGAAA AACTCAGCCG ATTACTTTCT GGGTGGCCGT
TCATTAGGGC CATGGCCTGC AGCACTCTCT GCTGGCGCAT CCGACATGAG TGGCTGGTTA
CTGCTCGGTC TGCCGGGTTA CGCGTATGCC GCCGGCATTG AATCATTCTG GTTGGCTGGC
GGCTTGCTCG TCGGTACTTG GGCTAACTGG TTAGTGAATG CTAAGCGTCT GCGCACCTAC
AGCATCACCA CGGACTCTCT GACTTTACCT GAGTTTTTGT CACGCCGTTT TAACGATAAC
TCAAAACTCA TCCAAACCAT TTCTGCGTTC TTTATTCTGC TGTTCTTCCT CTTCTATACC
AGTTCGGGTT TGGTGGCAGG CGGTAAACTG TTTGAAACCG TATTCGGCTT GGATTACTCC
ACCGCGGTGA TCATAGGTAC GGTTTGTGTG GTGTCGTACA CCCTGTTTGG TGGCTTCTTA
GCGGTCTCTT GGACGGACTT GGTGCAAGGC TTGCTCATGG CAGCGGCACT GATGATCGTG
CCGATTGCGG CAATGAATGG TGGCTTTACT CAGCTTAATC ACGATTTGGC AGCGATTAAC
CCTGAACTGC TGACCTTGTG GAATGACGCG AAAGGCGAAC CTCTGTCGGC GATTGCCATC
ATCTCTTTAG TGGCTTGGGG CTTGGGCTAT TTTGGTCAGC CGCACATTCT GGCGCGTTTC
AAAGCCTCAC GTTCCAATAA AGATCTGACC ACGGCGCGCC GTATCGCAGT AGTGTGGACT
GGGCTTTCAA TGGCTGGCGC GATTCTGGTC GGTTTAACGG GTCTGATTTT CGTTACTCAA
TCAGGCACGA TTGGTCTGGA TGATGGCGAA AAAATCTTCA TGCTATTAGT GAACTCGCTG
TTCCACCCAG TCATCGCTGG TATTTTGCTG GCCGCCATTT TGGCGGCAAT CATGAGTACT
GCGGATTCGC AGCTGCTGGT CTCTTCATCG GCACTCGCGG AAGATTTCTA CAAGCAAGTG
TTCAAAACCG ATGCTAGCTC CGAAGACATT GTCCGCGTTG GTCGCATCGC GGTGATTTTG
ATCTCGCTGA TTGCCCTGTT TTTAGCGATG ACGCCAGATA GCTCAGTGCT GGGTTTGGTG
TCCTACGCTT GGGCTGGCTT TGGTGCGGCG TTTGGTCCTG CTCTGGTCTT GAGCCTGTAC
TGGCCGCGTA TGAACCGTCA TGGTGCGCTA TCGGGGATCA TTGTCGGTGG TGTGACGATT
GTGGTTTGGA AACAACTGTC TGGCGGTTGG TTTGATGTGT ACGAAATCGT ACCGGGAATT
ATCCTTTCAA CCCTGTCGAT TGTTGTGGTC AGCCTGCTCA CCGGCGAACC GGATGAGAAG
GTAAAAGCGC AACACGCCAC CTTCAAAAAG CAGTTGATTG AACTGGAATA A
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| Protein sequence | MENSFAITTT FIVYLILMLA IGVYAYQRTK NSADYFLGGR SLGPWPAALS AGASDMSGWL
LLGLPGYAYA AGIESFWLAG GLLVGTWANW LVNAKRLRTY SITTDSLTLP EFLSRRFNDN
SKLIQTISAF FILLFFLFYT SSGLVAGGKL FETVFGLDYS TAVIIGTVCV VSYTLFGGFL
AVSWTDLVQG LLMAAALMIV PIAAMNGGFT QLNHDLAAIN PELLTLWNDA KGEPLSAIAI
ISLVAWGLGY FGQPHILARF KASRSNKDLT TARRIAVVWT GLSMAGAILV GLTGLIFVTQ
SGTIGLDDGE KIFMLLVNSL FHPVIAGILL AAILAAIMST ADSQLLVSSS ALAEDFYKQV
FKTDASSEDI VRVGRIAVIL ISLIALFLAM TPDSSVLGLV SYAWAGFGAA FGPALVLSLY
WPRMNRHGAL SGIIVGGVTI VVWKQLSGGW FDVYEIVPGI ILSTLSIVVV SLLTGEPDEK
VKAQHATFKK QLIELE
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