| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0168 |
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| Symbol | |
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| ID | 5134708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 197155 |
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| End bp | 198018 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530491 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001215009 |
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| Protein GI | 147672270 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000293268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGC AAATCCCACC TGATGAGGTT GAAATGGCTC AATCGCATGC CCCAGAGGCT
GGCAAGGCTT CTTCCATTGC CAAAGTTTTG TCGCCTAAAC CGGCAGAACT GATCACTTTG
CCTTCACATA TGGCTTGCCA TGATCATAGT TACACGCAAA TTGTGATTGG CTTGAAAGGG
CAGGCTGAAT TTGAAGTCCG TGGTATGGGG AATATTGTCG GGCCCGGGCA GGGGTGTGTG
GTGACATCCG GTTCGGATCA TGCGTTTGGT GGTGTCGTGG GGCAATCGGA TATTCTGGTG
CTCAATATGC CAGTGCCGAG TGACGATGAT CCGCTACTAC TGCGCAAACT CAATGAACTC
GTGGTCGGTG ACGTTTATTT TCAACTCGAT GGTCAGATCC AACGTTTAAT TCAAATGCTG
GTGCAGGAGA TGCAAGCCAG TCCTGACGAC TTGCTGCTTG GCCGAGCTTG TAACGATACG
GTTGTTGCAC TTTTGCAGCG CCACATCAGC GCGCTGGCCA GTGTCCATAA AGAGTCTCGC
TTTGATATGG AAGTGGTGGA TCGCTATATC GAGCAGCACT TAGCGCACCG AATTTCCGTT
GCACAGTTAG CAGGAAGCGT GTTCTTAAGT GAAAGCCAAT TTCATGTCTT GTTCAAAGAG
CAAATGGGGC TCACGCCGCA TCAATATGTG TTGAACAAAC GCGTCGATAT GGCGAAGAAG
TTGATTGAGC AAGGTCGACT TAATTTGGGT CAGATTGCGG AGCTGACGGG TTTTTCCAAT
CAAAGTACGT TCACGCATAC TTTTTCTCGG TTACATGGTA TTTCACCTTC GCAATATAAG
CGGCGCTTTT CTTCTTCGAT CTAA
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| Protein sequence | MAAQIPPDEV EMAQSHAPEA GKASSIAKVL SPKPAELITL PSHMACHDHS YTQIVIGLKG
QAEFEVRGMG NIVGPGQGCV VTSGSDHAFG GVVGQSDILV LNMPVPSDDD PLLLRKLNEL
VVGDVYFQLD GQIQRLIQML VQEMQASPDD LLLGRACNDT VVALLQRHIS ALASVHKESR
FDMEVVDRYI EQHLAHRISV AQLAGSVFLS ESQFHVLFKE QMGLTPHQYV LNKRVDMAKK
LIEQGRLNLG QIAELTGFSN QSTFTHTFSR LHGISPSQYK RRFSSSI
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