| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0163 |
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| Symbol | pdxH |
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| ID | 5134271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 191956 |
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| End bp | 192591 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530486 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001215004 |
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| Protein GI | 147672221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.265005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCTTT CAGATATTCG CCGCGAATAC ATTCATGGTG GTCTAAGAAG AAAAGATTTG
CAGGCCAACC CAATTGACCA GTTCAATCTT TGGTTGCAGC AAGCAATTGA CGCCAACTTG
TCCGACCCAA CCGCGATGAC GGTTGCGACG GTAGATGAAC ACGGGCAACC TTTTCAGCGT
ATCGTGCTAC TGAAAAATGT CGATGATGTC GGTTTTGTGT TTTACACCAA CTTGGGCAGC
CGCAAAGCGC AGCATATTGC GCACAATAAC AAAATTAGCC TCCATTTCCC TTGGCATCCG
CTAGAACGTC AAGTGCACAT CACAGGTGTG GCGGAAAAAC TGACCGCCAT GGAAAACATG
AAGTATTTCA TGTCGCGCCC GAAAGAGAGC CAGATAGCAG CAATCGCTAG CCACCAAAGT
AGCCGAATCT CTGCTCGTGG AGTATTGGAA GGCAAGTATC TTGAGCTTAA GCAGAAGTTT
GCAAACGGTG AAATTCCTGT GCCTAGCTTC TGGGGCGGTT ACCGCATCAG GCCGGAAAGT
CTGGAATTTT GGCAGGGTGG TGAACATCGT CTGCATGATC GCTTCTTGTA TTCGCGGCAA
GATGACAATT GGACAGTCGA TAGACTGGCG CCATAA
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| Protein sequence | MDLSDIRREY IHGGLRRKDL QANPIDQFNL WLQQAIDANL SDPTAMTVAT VDEHGQPFQR
IVLLKNVDDV GFVFYTNLGS RKAQHIAHNN KISLHFPWHP LERQVHITGV AEKLTAMENM
KYFMSRPKES QIAAIASHQS SRISARGVLE GKYLELKQKF ANGEIPVPSF WGGYRIRPES
LEFWQGGEHR LHDRFLYSRQ DDNWTVDRLA P
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