| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0158 |
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| Symbol | |
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| ID | 5134801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 183820 |
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| End bp | 185490 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530481 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214999 |
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| Protein GI | 147672191 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAAAG AGATACTCGA ACTCACGCCA GATAGACAGA AAGTGATTGC AAAATTAGGT
GCACAAGGTG CCGCTAAGGA GCTCAATCGC AGCGAATTGC CTATGGTGTT GGCACAAATT
GGAGCGGGTA AACTGTTCAT ATTGGATGAG GAAGTCACTC GTTTTATCAA TTGTGTGAAA
GAAAGTAAGC GCGCTGCGTT TGAAGGTATC GTGATTGCTG AAGTGCGTAA CGCGACGGTT
TCTGTTGTGC TTGGTGAGAA AGAAATGCTA GCCAGCATGG TCGTCACTGG AGCTTATGGC
GGACGCGGTC TACGCGGTAA TGAACTGGTT CATGCTCTAG CACAAGCCAG CGTGCTGAAA
GGAATTAACA AACTGGCATT GAAAAAAGTA CTGCTGGTGA GTGGTCAATT AAAACCCGGT
GAGGTGTTTA CTCAGCCTGT CGCTCGTGGC AAGGAGCCCA TTCAAGGGCG TGATACTCAA
TTTGTACCAT TAGTGGAAGA CGTCTCGAAG CGCGTGCTGC GCCCTCAGCA GAAAGCGGGT
GAAAATAAAC TCGATATGCG CAACTTAGGA GAAACCATCA CGGTTGGTGA AAATGATCCT
GTGATGCGCC GTTTGCCTGC GACCAAAGGC GAGATGGGTT ACACCGTTCA GGGCAAACCT
ATCCCACCTA AGCCTGGTAA AGAATCCGCT TTGGTGGCGG GTAAAGGTAC CCATATCTCC
CCGAATGACC CCAATTTGTT GCTTGCCAGT CAAGCTGGCA TGCCCCTTAT TAAAAAGAAC
ACCATAGAAG TGGACAGTGC GCTTTGCCTA AATCATGTCA GTGTGGCCAC TGGGCATATC
CGCTTTAAAG GTAATGTCGT GATTGCTGGG GATATTGAAC CGGGCATGAT TGTTCGCGCG
ACGGGGTCGA TTACGGTTGG CGGTTTTATT GAATCTGCTA ACGTTCAAGC ACAAGGCGAT
ATAGACGTCG GTAAAGGCAT CATCGGACAC ATGGTGACGG ATGATGAAGA GCGCAGCTGC
GTGGTGAAAT CTGGCGGCAG TATTCGCGCT AACTACGCGC AGTATGTTGA GTTACAAGCG
GCGGATTCTA TCCATCTTGG CGTACACAGC ATTGGCAATA TTATCCGTTG CGGAAATGAT
TTGACGGTGC TCGACAGCAA AATGACCCAA GGCACACTCA GTGCAGGAAA CGCCAAAGTG
GGTGGGAAAG TGCTCTGCTT TAATCTCGGT GTGGAGGGCG ACACGGCGAC TCATGTTGAG
GCTTTTGCGC GTTACCAAAG TTATAAAGAG AGAATCAACA AACACAAAGA ACTCTATAAG
CAAGCTCAAG ACACGACAAT GGCGTTGATT CGGCGTGAAA TCGAGTTTAA AAAACGTCCG
AAAGCAGAAC GTAGCGATGA AGAAGCTCAA GAAATAGAAA CCGCGAAAGC AGACGCGTCG
ACCCAGATGG AAAAAATCAA ACTTGCTTTG GATATGCTCA ATGAAGAGTT TGAGCAGCAG
CTATTGGAAA ATACGGTGGA AGCGAAAAAT AAAGTATTTA CCCATGTCAC GATTCAGTTT
GGTGATGAGA AAGTGCTGAC CAAGCGAGAA CACGGCGCCT CGATTTTCAA ATTTAACCAA
TACGAAATTA AGCTCTCTTC ACTATTGGAA GCGGAAGATA TTGGTATTTA A
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| Protein sequence | MWKEILELTP DRQKVIAKLG AQGAAKELNR SELPMVLAQI GAGKLFILDE EVTRFINCVK
ESKRAAFEGI VIAEVRNATV SVVLGEKEML ASMVVTGAYG GRGLRGNELV HALAQASVLK
GINKLALKKV LLVSGQLKPG EVFTQPVARG KEPIQGRDTQ FVPLVEDVSK RVLRPQQKAG
ENKLDMRNLG ETITVGENDP VMRRLPATKG EMGYTVQGKP IPPKPGKESA LVAGKGTHIS
PNDPNLLLAS QAGMPLIKKN TIEVDSALCL NHVSVATGHI RFKGNVVIAG DIEPGMIVRA
TGSITVGGFI ESANVQAQGD IDVGKGIIGH MVTDDEERSC VVKSGGSIRA NYAQYVELQA
ADSIHLGVHS IGNIIRCGND LTVLDSKMTQ GTLSAGNAKV GGKVLCFNLG VEGDTATHVE
AFARYQSYKE RINKHKELYK QAQDTTMALI RREIEFKKRP KAERSDEEAQ EIETAKADAS
TQMEKIKLAL DMLNEEFEQQ LLENTVEAKN KVFTHVTIQF GDEKVLTKRE HGASIFKFNQ
YEIKLSSLLE AEDIGI
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