Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0141 |
Symbol | |
ID | 5134110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 165083 |
End bp | 166591 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530464 |
Product | hypothetical protein |
Protein accession | YP_001214982 |
Protein GI | 147671463 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGATTC GCCCTCTCTA TTCCGTTATT TTTCCTGTTT GCACTGAATT TTATCTTCCA GATTTTCAGT TGGCCTTACT TGTTCAAGCC TTTTTTGCTG TGTTACTTGT GCTGTCGGCC TTAATCAGCT TCGCTGGCTT TCAATACGGT GTGATTGTCG ATCAAGATAT GTTAGTGAAT GTGTTGGAAA CCGACCGCGG CGAAGCGGGA TCTTATCTCA CAATCTACTC TGTACTTTGG TTGCTCGGGT TTGGCCTCGT GCCTGCGCTA GCTCTGCTTT TTACCCCAAT CCGCCCAGAA AAAAGTGCCC TGCGTTTTTT GATGAAAAAG GGGCTATCCA TGCTGGTTTC CGTTGTCGTG ATTGGCGTGA TCGCTGGGCT TTATTATCAG AATTACTCGT CCGTTGGACG CAACAACAGC TCACTCAAAA AAATGATCAT CCCGACCCAT TTTCTCTACA GCAGTTTTGG GTTAGTCAAA CAGCGCTATT TCACGGAACC AATGGTGTAT CAGGAGATCG GTCAGGATGC GCAGCAAAAG CCAAGCGCCG TTCGTCAGGC AACCCAAAAG CCGACCTTAG TGTTTTTTGT GTTAGGTGAA ACTGCACGAG TACAAAACTA CCAATACTTG GGTTATCCGC GTGATACCAA TGCTTATACC GCCCCTTTCC AGCCGATCTT TTTTAAAGAT GTGGCGAGTT GCGGTACAGC AACCGCCGTT TCAGTGCCTT GTATGTTCTC CAACATGAAT CGCCAAAATT TTGATCGCTC TCGGGCGGAC AACCAAGACA ATGTGCTGGA TATTCTGCAG CGTGCGGGCA TCAGTCTGCT CTGGAAGGAA AATGACGGTG GCGATAAAAA TGTCGCGAAG AATATCCCGC TTAAAGAGTT AGCTAGAGAT AACCGAGAAG GGATTTGCGA TGGCGACACC TGTTACGACA TTGCGATGTT AGAGAATTTA GATCAGGAGA TCGCCACGCA GCAGGGCAAC CGAATGATTT TCATGCATTT CATCGGTAGC CACGGCCCCA CTTACTTTAA ACGTTACCCA AAAGAGATGG CAGTTTACCA GCCTGACTGC CCAAGAGCAG ATATTGAAAA CTGTAGCGTC GAGCAGATCG TAAACACGTA TGACAACACC ATTCGCTACA GCGACTATGT GATGTCGCAG CTCCTCGCTA AGCTCGATTC ACTGCAAGAC CGATATAATA CCGCGCTGAT TTATATCTCC GATCATGGTG AATCATTAGG TGAAAATGGC CTGTTTTTGC ATGGTATGCC CTATAGCCTA GCGCCTGAGT ACCAGACTCG AGTCCCTCTC CTTATCTGGA TGTCCTCTGG GTTTAGCCAA AGTAAAGGGA TTGATGTTGA ATGCCTGCGC AGCAACAGTG AATTACCTTA TGCGCACCAG AATCTGTTTC ACTCACTGCT CGGCGTGATG GATGTATCAA CCAAAGCGTA CCAAGCCAAT TTGGATCTGT TTGCGAAGTG TAGAACCAGC CAATCTTAG
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Protein sequence | MGIRPLYSVI FPVCTEFYLP DFQLALLVQA FFAVLLVLSA LISFAGFQYG VIVDQDMLVN VLETDRGEAG SYLTIYSVLW LLGFGLVPAL ALLFTPIRPE KSALRFLMKK GLSMLVSVVV IGVIAGLYYQ NYSSVGRNNS SLKKMIIPTH FLYSSFGLVK QRYFTEPMVY QEIGQDAQQK PSAVRQATQK PTLVFFVLGE TARVQNYQYL GYPRDTNAYT APFQPIFFKD VASCGTATAV SVPCMFSNMN RQNFDRSRAD NQDNVLDILQ RAGISLLWKE NDGGDKNVAK NIPLKELARD NREGICDGDT CYDIAMLENL DQEIATQQGN RMIFMHFIGS HGPTYFKRYP KEMAVYQPDC PRADIENCSV EQIVNTYDNT IRYSDYVMSQ LLAKLDSLQD RYNTALIYIS DHGESLGENG LFLHGMPYSL APEYQTRVPL LIWMSSGFSQ SKGIDVECLR SNSELPYAHQ NLFHSLLGVM DVSTKAYQAN LDLFAKCRTS QS
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