Gene VC0395_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0141 
Symbol 
ID5134110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp165083 
End bp166591 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content47% 
IMG OID640530464 
Producthypothetical protein 
Protein accessionYP_001214982 
Protein GI147671463 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGATTC GCCCTCTCTA TTCCGTTATT TTTCCTGTTT GCACTGAATT TTATCTTCCA 
GATTTTCAGT TGGCCTTACT TGTTCAAGCC TTTTTTGCTG TGTTACTTGT GCTGTCGGCC
TTAATCAGCT TCGCTGGCTT TCAATACGGT GTGATTGTCG ATCAAGATAT GTTAGTGAAT
GTGTTGGAAA CCGACCGCGG CGAAGCGGGA TCTTATCTCA CAATCTACTC TGTACTTTGG
TTGCTCGGGT TTGGCCTCGT GCCTGCGCTA GCTCTGCTTT TTACCCCAAT CCGCCCAGAA
AAAAGTGCCC TGCGTTTTTT GATGAAAAAG GGGCTATCCA TGCTGGTTTC CGTTGTCGTG
ATTGGCGTGA TCGCTGGGCT TTATTATCAG AATTACTCGT CCGTTGGACG CAACAACAGC
TCACTCAAAA AAATGATCAT CCCGACCCAT TTTCTCTACA GCAGTTTTGG GTTAGTCAAA
CAGCGCTATT TCACGGAACC AATGGTGTAT CAGGAGATCG GTCAGGATGC GCAGCAAAAG
CCAAGCGCCG TTCGTCAGGC AACCCAAAAG CCGACCTTAG TGTTTTTTGT GTTAGGTGAA
ACTGCACGAG TACAAAACTA CCAATACTTG GGTTATCCGC GTGATACCAA TGCTTATACC
GCCCCTTTCC AGCCGATCTT TTTTAAAGAT GTGGCGAGTT GCGGTACAGC AACCGCCGTT
TCAGTGCCTT GTATGTTCTC CAACATGAAT CGCCAAAATT TTGATCGCTC TCGGGCGGAC
AACCAAGACA ATGTGCTGGA TATTCTGCAG CGTGCGGGCA TCAGTCTGCT CTGGAAGGAA
AATGACGGTG GCGATAAAAA TGTCGCGAAG AATATCCCGC TTAAAGAGTT AGCTAGAGAT
AACCGAGAAG GGATTTGCGA TGGCGACACC TGTTACGACA TTGCGATGTT AGAGAATTTA
GATCAGGAGA TCGCCACGCA GCAGGGCAAC CGAATGATTT TCATGCATTT CATCGGTAGC
CACGGCCCCA CTTACTTTAA ACGTTACCCA AAAGAGATGG CAGTTTACCA GCCTGACTGC
CCAAGAGCAG ATATTGAAAA CTGTAGCGTC GAGCAGATCG TAAACACGTA TGACAACACC
ATTCGCTACA GCGACTATGT GATGTCGCAG CTCCTCGCTA AGCTCGATTC ACTGCAAGAC
CGATATAATA CCGCGCTGAT TTATATCTCC GATCATGGTG AATCATTAGG TGAAAATGGC
CTGTTTTTGC ATGGTATGCC CTATAGCCTA GCGCCTGAGT ACCAGACTCG AGTCCCTCTC
CTTATCTGGA TGTCCTCTGG GTTTAGCCAA AGTAAAGGGA TTGATGTTGA ATGCCTGCGC
AGCAACAGTG AATTACCTTA TGCGCACCAG AATCTGTTTC ACTCACTGCT CGGCGTGATG
GATGTATCAA CCAAAGCGTA CCAAGCCAAT TTGGATCTGT TTGCGAAGTG TAGAACCAGC
CAATCTTAG
 
Protein sequence
MGIRPLYSVI FPVCTEFYLP DFQLALLVQA FFAVLLVLSA LISFAGFQYG VIVDQDMLVN 
VLETDRGEAG SYLTIYSVLW LLGFGLVPAL ALLFTPIRPE KSALRFLMKK GLSMLVSVVV
IGVIAGLYYQ NYSSVGRNNS SLKKMIIPTH FLYSSFGLVK QRYFTEPMVY QEIGQDAQQK
PSAVRQATQK PTLVFFVLGE TARVQNYQYL GYPRDTNAYT APFQPIFFKD VASCGTATAV
SVPCMFSNMN RQNFDRSRAD NQDNVLDILQ RAGISLLWKE NDGGDKNVAK NIPLKELARD
NREGICDGDT CYDIAMLENL DQEIATQQGN RMIFMHFIGS HGPTYFKRYP KEMAVYQPDC
PRADIENCSV EQIVNTYDNT IRYSDYVMSQ LLAKLDSLQD RYNTALIYIS DHGESLGENG
LFLHGMPYSL APEYQTRVPL LIWMSSGFSQ SKGIDVECLR SNSELPYAHQ NLFHSLLGVM
DVSTKAYQAN LDLFAKCRTS QS