Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0092 |
Symbol | |
ID | 5134443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 102731 |
End bp | 103957 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640530415 |
Product | sodium/glutamate symporter |
Protein accession | YP_001214933 |
Protein GI | 147672016 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000111115 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGA TCATTTCAAT TGGAGCATTA GAGTCTTTTC TTATTGCTAT CAGTGTCCTG TTTTTAGGTC ACTTTATTAA TGCCAAACTG CCCATTTTAA CCAAGTTCAA CATTCCAGAG CCGATTGTGG GTGGGCTTAT CGTCGCCTGT GTGATTACTG CGTTGCACTT TCACGGTATT GATATGGAAT TTTCACTGCC GCTGCAAAAT GTCTTCATGT TGATGTTCTT TAGTACGGTG GGCCTTGCGG CCAACTACAC CCAACTGATT AAGGGTGGCG CGAAGGTGTT TCTGTTTTTA GCCGTGGCTT CGGTGTTCAT CATTATTCAA AACGGTGTGG GCGTTTCGCT TGCAGCAGGT TTAGGCTTAG ATCCTTTACT GGGCTTGATC GCAGGCTCCA TCACACTCTC TGGAGGCCAT GGCACGGGAG CGGCTTGGGC AAACACGTTT GCCGAAAATT ATGGCCTTGC CAATACGTTA GAAATCGCGA TGGCATCTGC CACTTTTGGT TTGATCATCG GTGGGATTAT CGGTAGTCCA GTCGCGCAGA AACTGGTTGA TAAACATGGT ATTGAATCTG AGTATGGGCG CGGCACACAA ACCCACTCTC GTTTTCCTGA ACTGGTCACT TATAACGAAT ATGAAGAAGA TAAAGTCACC GCCAAAAAGG TGATTGAAAT CTTGTTTATC TTGCTCATAT GCGTTACCGG AGCAAAATAC CTAGAAGCTT GGGTTAAAAC CTTTGAAATT CGTTGGTTGA TGATCCCCGA TTTCGTTTAC GCCCTGTTTA TTGGTGTCTT TATCACCAAT CTGCTCGAAG TCACTAAGCT GCGTAAGGTG GATGCGGAGA CGGTGGATAT TTTAGGCACG GTTTCTTTGT CGCTGTTTCT CGCTATGGCT CTGATGAGCC TGAAATTGTG GAATATCTTC GATTTAGCAC TACCGTTTTT GGTGATCCTC GCTATTCAAT CGGTCGTGCT GGGCGTCTTT TGCTACTTCG TCACCTTCAA AGTGATGGGG GCTAATTATG ATGCAGCGGT GATTTCGGCT GGGCATTGTG GTTTTGGTTT GGGGGCAACG CCTACCGCGG TGATGAATAT GGGATCGGTC GTAAAACGCT TTGGCCCTTC ACCACAAGCG TTTATGGTGG TGCCGATCGT CGGTGCTTTC TTTATCGACA TCGTTAACCT AATCATCTTG CAGGGGTACA TTTCATTTTT GGGATAA
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Protein sequence | MNQIISIGAL ESFLIAISVL FLGHFINAKL PILTKFNIPE PIVGGLIVAC VITALHFHGI DMEFSLPLQN VFMLMFFSTV GLAANYTQLI KGGAKVFLFL AVASVFIIIQ NGVGVSLAAG LGLDPLLGLI AGSITLSGGH GTGAAWANTF AENYGLANTL EIAMASATFG LIIGGIIGSP VAQKLVDKHG IESEYGRGTQ THSRFPELVT YNEYEEDKVT AKKVIEILFI LLICVTGAKY LEAWVKTFEI RWLMIPDFVY ALFIGVFITN LLEVTKLRKV DAETVDILGT VSLSLFLAMA LMSLKLWNIF DLALPFLVIL AIQSVVLGVF CYFVTFKVMG ANYDAAVISA GHCGFGLGAT PTAVMNMGSV VKRFGPSPQA FMVVPIVGAF FIDIVNLIIL QGYISFLG
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