Gene VC0395_0091 details

Gene Information

• Locus tag: VC0395_0091
• ID: 5134571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 101894
• End bp: 102652
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640530414
• Product: hypothetical protein
• Protein accession: YP_001214932
• Protein GI: 147671554

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0000127543
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAC GGCCCGCTGA AAAAATTGAT AATAATGATG GCCAAACAGA GACTCCACGC 
AGTAAAACGG TGTCGACCAT CAACAGCACG GATGCGCTGG CCATGGTTGA ACACAGTAGT 
GAGCTGACTT TAAGCATTAC GACCCCTGTC GGAACAAAAT TCGTCTGCCG CACTCCGTTT 
ATTGGTACTC ATACGGATAA GTTTTTACTG GTGGAAATGC CCAAAATATC GGCTGATGAT 
CTGCAATATT TCTTCCAAGA AGGGTTTTGG ATGAATATTC GCGCGATTTC ACCACGCGGT 
GAAGGAGCGC TGATCCATTT CCGCAGCCAA CTGATGCACA TCTTACAAGA GCCGGTTCCC 
ATGGCTTTTC TCTCCATTCC CAATACCATG CAAGTCTCTC AATTACGTAA AGAGCCGAGA 
TTTGAGCTAA ATTTAGCCGG CAAAGTACTG TTTGATGAGC ATCGTGGGGA TTGTGAACTG 
CGCGATTTAT CACGCAGTGG TTGCCGTTTC ATCACGCCGC CTTTAGGCAA AACGTACCAA 
GTCGGGGATT TGGTCGCGTT AGAGATTTTT TCAGACTTGA GGGGCACAAA AACCTTCCCG 
CCTTTGACCG GAAAAATCTG TAACTTACAG CGCTCACTGC ACCATGCTCG TTATGGTTTA 
GAGTTCAATG AAGAGGGGCG AAATAACGCC AAAAACTTGC TCGCACAGCT TAAGTTTAAC 
GGCACCAAAC TGACTCTTAA TGCCGAGAAA AAGGCGTAA 

 

Protein sequence

MNSRPAEKID NNDGQTETPR SKTVSTINST DALAMVEHSS ELTLSITTPV GTKFVCRTPF 
IGTHTDKFLL VEMPKISADD LQYFFQEGFW MNIRAISPRG EGALIHFRSQ LMHILQEPVP 
MAFLSIPNTM QVSQLRKEPR FELNLAGKVL FDEHRGDCEL RDLSRSGCRF ITPPLGKTYQ 
VGDLVALEIF SDLRGTKTFP PLTGKICNLQ RSLHHARYGL EFNEEGRNNA KNLLAQLKFN 
GTKLTLNAEK KA