| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0080 |
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| Symbol | phrB-2 |
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| ID | 5134102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 87220 |
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| End bp | 88629 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530403 |
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| Product | deoxyribodipyrimidine photolyase, cyclobutane pyrimidine dimer-specific |
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| Protein accession | YP_001214921 |
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| Protein GI | 147672153 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000198558 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTGG TTTGGTTTCG TCGTGATCTG CGCAGCTTTG ATAATACTGC GCTCACCGCC
GCGTTAAACA GTGGCGATCC GGTTGCGGCG ATGTATATCG CTACTCCAGA GCAGTGGCAT
CAGCACCATC TAGCGCCTAT TCAAGCCGAT TTGATTTGGC GACGTTTGGC AGAGTTGCAA
CAAGAGCTTG CTGCGCTTAA CGTGCCACTT TTTTATCAGC AAGTCGCGGA TTTTCAAGCG
GCGGCTGTGG CGGTTAGCCA GTTGGCGAAA ACACTTAATG CCAAACAAGT TCTCGCCAAT
CGTGATTACG AATTGGACGA GCAGCAACGT GATCAATCGG CACAGCAGTT ACTGAGCGAA
CAAGGGATAA CATGGTCTGC TTTTGATGAT AAATGCGTAT TACCTCCCGG TTCGGTGCGC
ACGAAACAGG GCGAATTTTT TAAAGTGTTC ACCCCTTTCA AGCGCGCATG GCTCACTCTT
TTTCAGCCGC CTGTGATTGG AAAAAATCGT CCCGCAGCGC TTTGGAACGT ACCGAGTGCG
TTGGCCGAAT TGGTTTGGCA TCCAGAACAA GCATTCGATT ACCCCAGAAT AGACAGCACG
CCGTGGGCTG CGGACTTTGA GACTGTGCGC GCTCAATTGC GTGAATTTTG CCGTGAACGA
GTGCAGGACT ACCATCAAGC GCGTGATTTT CCGGCTCAGG AAGGCACCAG TTCGCTCTCA
CCCTACTTGG CGATTGGCGT GTTATCGGCG CGTCAATGTG TGGCTCGCTT GTATCACGAG
TCATCAATGG GCGAACTCAG TGAAGGGGCA CAAGCCTGGT TGAGCGAACT CATCTGGCGT
GAGTTTTACC AGCATTTGGT TGCAATTGAG CCTAATCTTT CGAAAAGTCG TGACTTTGTG
GAGTGGGGCG CGCGTTTGGA GTGGTGGAAT GATAACGAAA AGTTCCAGCT CTGGTGTGAA
GGCAAGACTG GGTATCCGAT CGTCGATGCG GCAATGCGCC AACTGAACCA AACCGGATGG
ATGCACAATC GGTTAAGGAT GATCGTGGCG AGCTTTCTTA CCAAAGATCT GCACATCGAC
TGGCGCTGGG GTGAGCGCTA TTTCATGAGT CGCCTGATTG ATGGTGATTA TGCGGCCAAC
AATGGTGGTT GGCAGTGGTG TGCATCCACT GGGTGTGATG GACAGCCCTA TTTTCGGATT
TTTAATCCGG TCAGTCAGGG GGAGAAATTT GACCCGAATG GCGACTTCAT CCGCCGTTGG
GTGCCGGAGC TGCGTTCAGT TTCTTCGGCT TATATTCATC AACCTTGGGC TTATCCGGCT
GTCAATAGCG TGTTATATCC TGCGCGACTA GTTGATCATA AGCAGGAAAG AGAAGTAACC
TTACGTCTGT ATAAAACAGC GAAGGGATAA
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| Protein sequence | MRLVWFRRDL RSFDNTALTA ALNSGDPVAA MYIATPEQWH QHHLAPIQAD LIWRRLAELQ
QELAALNVPL FYQQVADFQA AAVAVSQLAK TLNAKQVLAN RDYELDEQQR DQSAQQLLSE
QGITWSAFDD KCVLPPGSVR TKQGEFFKVF TPFKRAWLTL FQPPVIGKNR PAALWNVPSA
LAELVWHPEQ AFDYPRIDST PWAADFETVR AQLREFCRER VQDYHQARDF PAQEGTSSLS
PYLAIGVLSA RQCVARLYHE SSMGELSEGA QAWLSELIWR EFYQHLVAIE PNLSKSRDFV
EWGARLEWWN DNEKFQLWCE GKTGYPIVDA AMRQLNQTGW MHNRLRMIVA SFLTKDLHID
WRWGERYFMS RLIDGDYAAN NGGWQWCAST GCDGQPYFRI FNPVSQGEKF DPNGDFIRRW
VPELRSVSSA YIHQPWAYPA VNSVLYPARL VDHKQEREVT LRLYKTAKG
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