Gene VC0395_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0071 
Symbol 
ID5134211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp75405 
End bp75965 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content52% 
IMG OID640530394 
Producthypothetical protein 
Protein accessionYP_001214912 
Protein GI147672139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCC TCTCGACTAT GGCCACTCTG TTGGCGTTGA GCTTACCGGT AATGGCGCAA 
GAGTGTGCAA GTGATATTAT GCGCACCGCA CCCAACTTAC GTTATGTGTA CAGCACCCAA 
GGAACAGTAA AAGACCTGCA CACAGGGTTA ACGTGGATGC GCTGCACCTT TGGCAAAGAG 
TGGAATGCTG AGCAAGGACG TTGTACAGGA CAGGCGCAAC CTCTGCGCTG GCAAGCGGCA 
CTGCAAGAAG TGCAAGCGAT CAATCACCCG GGTAGCCGTC ACCGTTTACA CCAGTTTGCG 
GGTGTTAAAC AGTGGCGCAT GCCAAACATC AAAGAGCTAA GCAGTTTGAC CGAACAAGCC 
TGCTTTGCGC CAGCGGCGAA TGAGACGGCG TTTGCCTCTG GCTTAGTGAC CGAGGTGGGC 
AACTATGCCG CTTATTTATG GAGTAATACC ACGCGTATTG AGCGTGAAGA AGCTTGGACG 
TGGGATGCCA TTAACGGCGA GATTTATGCG TACTCGATTC ACGCTCATGA AATGGGGTTG 
CTCCTTGTGG CGGATGAGTA A
 
Protein sequence
MKTLSTMATL LALSLPVMAQ ECASDIMRTA PNLRYVYSTQ GTVKDLHTGL TWMRCTFGKE 
WNAEQGRCTG QAQPLRWQAA LQEVQAINHP GSRHRLHQFA GVKQWRMPNI KELSSLTEQA 
CFAPAANETA FASGLVTEVG NYAAYLWSNT TRIEREEAWT WDAINGEIYA YSIHAHEMGL 
LLVADE