| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0058 |
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| Symbol | |
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| ID | 5134056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 59197 |
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| End bp | 60084 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530381 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001214899 |
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| Protein GI | 147672172 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0206813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGC TGCAGAGCGC AAAAACCTAC ATCAAAGTCG TTGAGGAAGG CAGTTTCAAT
GGCGCAGCAC GCAAACTCAA CACCACCAGT TCGGCGGTCA GTAAGCGTAT TCACTGGCTT
GAGGAGCGTA TTGGAGTTCA ACTGCTGAAA CGCACGACAC GTTCAGTTAC GCAGACCGAA
GCCGGAGCGC TTTTTTATCA ACGAGCCAAA GCACAGTTAG AAAGCTGGCA ATCCGTGGTC
GATGAAACAC GCTCCGTCAA CCAAACGCCC GCAGGCTTGC TGCGTATCGG TGCAACCTTA
GCGGTCGGCT CTAAATTTTT GATGCAGTAC CTCGATGAGT TTTTACAACG CTATCCCGAT
ATCCGCGTTC AGCTCATCAC CACCACACCG GGACAATTAC CTGAACTGCA TCTCGATCTG
TTCATCAGCC GTGAAATTGA GCAGCTCAAT TCGCTTAGCT TCAAAGCCAC TCCCCTATTT
GAGTATCAAG CGGCGTTTTA TGCCTCTCCG AGCTATTTGG CTAAACATGG CGTTCCACAA
ACGCTACAGG AGTTAACTGA GCACAATGTG CTGTGCTGGG GGGAGCAAAC ATTTCGCGAA
GTAAAAACAG CGCAAGGCAA ACGTCTCACG TTAACGGGCA ATTTCGCCAC CACCAACCCT
GAAGCCTTGT TTTATGCAGG GAAAGCCGGC ATGGGGATTA TTGTCACTGG GCATATTATG
ATCAAAGAAG AGCTAAAACA GGGCAATTTG GTTCGCCTAT TGCCTGATGT CACTATAGAT
CAAGCGACCG TATACGCGTA CTACCCCAAA TTGGAGTACC AACATACCCG TACTCAGCTA
TTCCTTGATC ATTTAAAGCA GAAGTTAGTG CAAAACAAAA CTGAATAA
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| Protein sequence | MDWLQSAKTY IKVVEEGSFN GAARKLNTTS SAVSKRIHWL EERIGVQLLK RTTRSVTQTE
AGALFYQRAK AQLESWQSVV DETRSVNQTP AGLLRIGATL AVGSKFLMQY LDEFLQRYPD
IRVQLITTTP GQLPELHLDL FISREIEQLN SLSFKATPLF EYQAAFYASP SYLAKHGVPQ
TLQELTEHNV LCWGEQTFRE VKTAQGKRLT LTGNFATTNP EALFYAGKAG MGIIVTGHIM
IKEELKQGNL VRLLPDVTID QATVYAYYPK LEYQHTRTQL FLDHLKQKLV QNKTE
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