| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0050 |
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| Symbol | |
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| ID | 5134753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 52719 |
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| End bp | 53612 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530373 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214891 |
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| Protein GI | 147671653 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTGG TGAACTTGCT GCAACTGCTC TGTTTGGCTG CGATTTGGGG CGGATCATTT
CTTTTTATGC GTATTGCTGC CCACAGCTTT GGTCCCGCTT ACCTGATAGA AGCTCGCGTA
GGATTTGCCG CACTCAGTCT CTTTTTAGTG GCGCAGCTAC TCAGGCGATC ACTGCCAATA
CGCCAGCATT GGCCACATTT TTTGATTTTG GGCTTAATCA ATACCGCCGT TCCCTTTTTA
CTGTTTGCTT ATGCGGCGTT AACTCTAAAT GTTTCAACAC TCTCCATACT CAACTCCACA
GCGCCCATTT GGGGAGCAGT GATTGGCTTT CTCTGGCATG GTACTCCTCT CTCCCGTAAA
GCGGTGGCTG GGCTTCTGCT AGGCGTAAGC GGTGTGGCGG TTATTGTAGG ATGGGATATG
GTGGCGATAG GACATCACGC TGCGCTACCG ATGGTATGCG CCGCGCTCGC AGCAGCCAGT
TACGGCTTAG CCACCAACTA CACCAAACAA GCACCCCAGC TCTCCGCGTT TGAAAATGCC
CATGGCAGTA TGTGGGCCGC GTGTTTATGG GTTGCTCCAC TGATGTGGTT TGTTCCTCTA
CGTGAAACGC CTTCCAGCTT AGAATGGGGA GCGGTGATAT TGCTTGGGGT CATTTGTACT
GGGTTGGCTT ACTTAATCTA TTTCCGTTTG GTGAAAGCCA TTGGTGCGGC ATCCACACTT
TCCGTTACCT TCCTCATCCC CGTTTTTGGC ATCTTGTGGG GCTACTGGAT CCTCGATGAA
CCGATAGGGC TCAACACCCT GTTCGGTACT TTACTAGTCT TGGCAGGTAC CATGTTGGTT
ACCGGTTTTT CTCTACGTAA CGCCCGACTT TCACGCCAAC CGCAACCGCA TTAA
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| Protein sequence | MSLVNLLQLL CLAAIWGGSF LFMRIAAHSF GPAYLIEARV GFAALSLFLV AQLLRRSLPI
RQHWPHFLIL GLINTAVPFL LFAYAALTLN VSTLSILNST APIWGAVIGF LWHGTPLSRK
AVAGLLLGVS GVAVIVGWDM VAIGHHAALP MVCAALAAAS YGLATNYTKQ APQLSAFENA
HGSMWAACLW VAPLMWFVPL RETPSSLEWG AVILLGVICT GLAYLIYFRL VKAIGAASTL
SVTFLIPVFG ILWGYWILDE PIGLNTLFGT LLVLAGTMLV TGFSLRNARL SRQPQPH
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