Gene VC0395_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0047 
Symbol 
ID5134431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp51393 
End bp52022 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640530370 
Producthypothetical protein 
Protein accessionYP_001214888 
Protein GI147671916 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG TAATACTGCA CGGTTTGTAT ATGCATGGTT TGGTTATGCA ACCTCTCGCG 
CAACGTCTCA ATAAACTCGG ATATCAGACA GAAGTGATCA GCTACAACAC TTTAGCCATC 
GATGATGAAA AAGTATTTCA GACCATAGAC AGCGCACTAG CACAAGATCG CATCAACGTG 
TTGGTAGGAC ATAGTTTGGG TGGATTGATG ATCAAACATT ACCTACGTTC TCGTCACCCT 
TCACCCAATG TGATTTCTCA TGTGGTTGCT TTGGCCTCCC CCCTTAAAGG GGCATCGATT 
GTCCCTAAGA TCCAGCAGTT AGGGCTAGGA GCTATGTTAG GTAACGCACA TCTGTATGGC 
TTGCAATTGC ATCAAGATAG CTGGGAATTG CCACAACGGC TGGGTTGCAT TGCAGGAACA 
TTGCGTTTCG GATTTCGCCC AATCTTACTC GGTGGCTCAG GAATGTGTGA TGGCACGGTC 
ACGGTTGCCG AGACTCAAAT CTCAGGAATG ACTGATCATC TTCTCTTGCA TCAAAGCCAT 
ACTGGATTGG TTTACAGCCA TAAAACCGCC CGTCAAATTG ACTACTTCAT TCGCCACAAT 
CAATTTCAGC ATAAAAAAAT CCCCGAATGA
 
Protein sequence
MKIVILHGLY MHGLVMQPLA QRLNKLGYQT EVISYNTLAI DDEKVFQTID SALAQDRINV 
LVGHSLGGLM IKHYLRSRHP SPNVISHVVA LASPLKGASI VPKIQQLGLG AMLGNAHLYG 
LQLHQDSWEL PQRLGCIAGT LRFGFRPILL GGSGMCDGTV TVAETQISGM TDHLLLHQSH 
TGLVYSHKTA RQIDYFIRHN QFQHKKIPE