Gene VC0395_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0044 
Symbol 
ID5134743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp49569 
End bp50267 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640530367 
Producthypothetical protein 
Protein accessionYP_001214885 
Protein GI147672338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATCAAA TGAAGTTATC AAGAATGTTA TTTTTATCGT TTGTTGTTCT ATTTTTTTTA 
GGTATTTCTT TACTCTATTT TACCTATTCA AGCACACCGC GTACTAATTT GCCTGATGAG
CGGCAGGAGC ACGTCATCGC TCCGAAACCG GCACCTGAGA TTGAGTTATC GATTCACGAA
CACCCTGCTG TTGAGCTTGA GTCAACGGAA AATCGGGTTG TGAATGAACA GGAAGAGGTG
CAAGAGCAAG GTGAAGCTCC TCGCGTGATC GAGCCACAAA ACCTAGAGCA AGTCTGGCTG
CCCATCAATC CTACGCCTGA ACTGGCAGAC CTGAAGCCGA AGAGCCAAGC CGTCACTGAT
ATTCAAGCGA TTGAGTTTGA AAATATCGAT CAGTTTCGCG TGTTAATGGC GGGGGATTCA
GCCACTTTGC CGCTGCCAAA TGGAGAGAGT ATTCGAGTTC TGATTGATGA GGCGCAAACT
CAAGCTCAAG GCATACAAAC ATGGGCCGGA AACTTTGAGA CGCAGGGTGG CACTTTTCCG
GTGACATTCA CTTTTGGCCA ACATTCCATC ATGGGTTTTA TTGGTCATCC CCAAGGTTCT
ATCAAAATAG AAGGGGTCGG ACACCAAGCA TGGGTGTACC AAGTCCCTGA TAGCCATGGT
TTCGAGCACG ATACGCAATC GCACGATCGC GCTCATTAA
 
Protein sequence
MYQMKLSRML FLSFVVLFFL GISLLYFTYS STPRTNLPDE RQEHVIAPKP APEIELSIHE 
HPAVELESTE NRVVNEQEEV QEQGEAPRVI EPQNLEQVWL PINPTPELAD LKPKSQAVTD
IQAIEFENID QFRVLMAGDS ATLPLPNGES IRVLIDEAQT QAQGIQTWAG NFETQGGTFP
VTFTFGQHSI MGFIGHPQGS IKIEGVGHQA WVYQVPDSHG FEHDTQSHDR AH