Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0044 |
Symbol | |
ID | 5134743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 49569 |
End bp | 50267 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530367 |
Product | hypothetical protein |
Protein accession | YP_001214885 |
Protein GI | 147672338 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTATCAAA TGAAGTTATC AAGAATGTTA TTTTTATCGT TTGTTGTTCT ATTTTTTTTA GGTATTTCTT TACTCTATTT TACCTATTCA AGCACACCGC GTACTAATTT GCCTGATGAG CGGCAGGAGC ACGTCATCGC TCCGAAACCG GCACCTGAGA TTGAGTTATC GATTCACGAA CACCCTGCTG TTGAGCTTGA GTCAACGGAA AATCGGGTTG TGAATGAACA GGAAGAGGTG CAAGAGCAAG GTGAAGCTCC TCGCGTGATC GAGCCACAAA ACCTAGAGCA AGTCTGGCTG CCCATCAATC CTACGCCTGA ACTGGCAGAC CTGAAGCCGA AGAGCCAAGC CGTCACTGAT ATTCAAGCGA TTGAGTTTGA AAATATCGAT CAGTTTCGCG TGTTAATGGC GGGGGATTCA GCCACTTTGC CGCTGCCAAA TGGAGAGAGT ATTCGAGTTC TGATTGATGA GGCGCAAACT CAAGCTCAAG GCATACAAAC ATGGGCCGGA AACTTTGAGA CGCAGGGTGG CACTTTTCCG GTGACATTCA CTTTTGGCCA ACATTCCATC ATGGGTTTTA TTGGTCATCC CCAAGGTTCT ATCAAAATAG AAGGGGTCGG ACACCAAGCA TGGGTGTACC AAGTCCCTGA TAGCCATGGT TTCGAGCACG ATACGCAATC GCACGATCGC GCTCATTAA
|
Protein sequence | MYQMKLSRML FLSFVVLFFL GISLLYFTYS STPRTNLPDE RQEHVIAPKP APEIELSIHE HPAVELESTE NRVVNEQEEV QEQGEAPRVI EPQNLEQVWL PINPTPELAD LKPKSQAVTD IQAIEFENID QFRVLMAGDS ATLPLPNGES IRVLIDEAQT QAQGIQTWAG NFETQGGTFP VTFTFGQHSI MGFIGHPQGS IKIEGVGHQA WVYQVPDSHG FEHDTQSHDR AH
|
| |