Gene VC0395_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0036 
Symbol 
ID5134905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp40039 
End bp41817 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content51% 
IMG OID640530359 
Productsulfate permease family protein 
Protein accessionYP_001214877 
Protein GI147671884 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID[TIGR00815] high affinity sulphate transporter 1 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGAAG TGAAAGCAGT GTGGATAAGG CAGTGGTTCC CCGGACTCTA CCAATTTAAA 
GATTATCAAC GGGGATGGTT AACCGATGAT GTACGAGCCG CCTTTTCTGT TGTGGCTGTA
GCGCTGCCTG TAGCGATCGC TTATGCGCAA TTAACCGGTG TGCCTGCTAT TGTCGGACTT
TATTCGTGTG TTTTGCCTAT GTTGGTCTAT GCGCTGATGG GCACCTCACG CCAATTGATT
GTGGGGCCAG ATGCCGCCAC TTGCGCGGTG ATTGCGGCCG TGGTTACCCC TCTTGCTGCC
GGAGATACCA CCAAGCACTG GCAACTGGTG ATGACCATGA CCGCCATGAC CGGTTTTTGG
TGCATATTGG CGAGTCGGCT CAAACTGGGC ATTTTCGCCG ATTTTCTCTC AAGGCCGATT
TTGTTAGGTC TGCTTAATGG GGTGGCGCTG ACGATTATTG TTGGTCAGTT TGCCAAAGTA
TTGGGGCTCA AGTATGAAAA ACGTTATCTG CTTGAACGGA TTGTTGAAGC GCCAGAGCTG
CTGTACTCCT TGCATTGGCA AACCTTGGGT TTGAGTGCGC TCACTTTAGC GATTTACTTA
GTGATCAAGC GCTGGCAGCC GAGATGGCCT GCGGCGATGT TTGCAATCAT GGTCGCGGCC
TTGCTGGTGT GGGCACTGAA TCTTGAAAGT GTGGGCGTAC AAGTGGTGGG GGTTATCCAA
GGCGGTTTAC CTGAGTTCCA AGCTCCGGCT TTTGATTTAG GGATCAGCCG TGAACTCGTT
ATGCCTGCGC TCAACTTAGC GATGGTGAGC TTTGTGAGTA TGATGCTCAC CGCTCGCAGC
TTTGCGGCTA AAAATGGCTA CGATATTGAT GCGGATAAAG AGTTCCGAGC GCTTGGTGTC
GCGAATGTCG CAGCCGCCTT TTCGCAAGGC TTTGCGATCA GTGGTGCCGA TTCCCGTACC
GCAGTCAATG ACGCCAATGG TGGTAAATCG CAACTGGTTT CGGTCATCGC AGCCTTGTTT
ATTGCGCTGG TGGCGGTTTT TGCTTATCAG CCTTTGCAAT TTATCCCTGT CGCGGCTTTG
GGCGTGGTGC TGATCATCGC CTCATTGTCT CTGCTCGATT TAAAAGGCGT TTGGAATTTA
AGAAAGCGCG ATAAAGATGC GTTTTACCTC GCACTCATCA CCTTTATCGC AGTGTTAGTG
ATTGGGGTGA TCCCAGGGAT CACTTTGGCG GTACTGCTGG GTTTATTCCA ATTTCTCAAA
TTGGTGATGC GCCCCACTGA TCAAATGATG GGATTGGATG AGGAAGGAAC GCTGCGCACA
CTCGATGGTT CAGAGAAAGC AAAACCGATC CCCGGCATGG TGATTTTCCG TTTCAATTCA
CCGCTGACCT ATTTTAACGC GCCCTATTTT AAGCGGCGTA TTCTCGATCA GACGGAGCGT
GAAGGCGCCC AAGTGGGTTG TGTGATCATT GATGCCGTGG CCAGTTTTAC CCACTTAGAT
CTGAGTGTGA TGGCGATGCT GGCTGACTTA CATGGCATCC TGAAAAAACG CGGTATCCGT
CTCATTCTAG CGGGGCGTAA GCGCAGTTTA CGCCATTGGT GTGATCTCAC CGGGATCAAT
ACCGCTGAAG GGGGAATCGT GCTGCGTGCC GATATGTATT TAGCCATCAA ACTGAGTGGT
TGTTACCTAA GTGCGATGGA AGAAGGCCAT GTCCCTGTGG TGCAGAAGGA ACCAGATATC
AGCGTGTTGC TAAAACCAAC CACGACCGAA GTGGCTTAA
 
Protein sequence
MNEVKAVWIR QWFPGLYQFK DYQRGWLTDD VRAAFSVVAV ALPVAIAYAQ LTGVPAIVGL 
YSCVLPMLVY ALMGTSRQLI VGPDAATCAV IAAVVTPLAA GDTTKHWQLV MTMTAMTGFW
CILASRLKLG IFADFLSRPI LLGLLNGVAL TIIVGQFAKV LGLKYEKRYL LERIVEAPEL
LYSLHWQTLG LSALTLAIYL VIKRWQPRWP AAMFAIMVAA LLVWALNLES VGVQVVGVIQ
GGLPEFQAPA FDLGISRELV MPALNLAMVS FVSMMLTARS FAAKNGYDID ADKEFRALGV
ANVAAAFSQG FAISGADSRT AVNDANGGKS QLVSVIAALF IALVAVFAYQ PLQFIPVAAL
GVVLIIASLS LLDLKGVWNL RKRDKDAFYL ALITFIAVLV IGVIPGITLA VLLGLFQFLK
LVMRPTDQMM GLDEEGTLRT LDGSEKAKPI PGMVIFRFNS PLTYFNAPYF KRRILDQTER
EGAQVGCVII DAVASFTHLD LSVMAMLADL HGILKKRGIR LILAGRKRSL RHWCDLTGIN
TAEGGIVLRA DMYLAIKLSG CYLSAMEEGH VPVVQKEPDI SVLLKPTTTE VA