Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0033 |
Symbol | |
ID | 5134286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 36274 |
End bp | 37194 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640530356 |
Product | hypothetical protein |
Protein accession | YP_001214874 |
Protein GI | 147672189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.737602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAGT TGAGTGCTCA GCAAGCCTAC GAAAATGGTC GTTTGCTACG TGCGCAATTT AAGAACTTAG CGGCTCGCGA ATATTTGAAA TACGCGGCAG ACCTTGGTGA GCCTAATGCG GCTTATCTTT ACGCGATGGA AGTGGCCAAC TACCGAACTA CCATTCGAAC CCCGCCTGAA AGCCAGCACT ATTTATTGCT CGCCGCTCAA GGTGGAAGCC GTCAAGCGAT GCGAGTGTTG TATCAAAACG GTGAGTGGCT CAGAGCTGCA GAACGCAGTT TATGGCAACA AACTTATTAC GATACTTTGA TTGAATTAGG CTCTCGTGAA CCGAGTCAGG CCGCTTATGA GCTCGCGCTG TTCCATCAAA AGGATAACCC CAAGCTTGCC CAGCATTATT TAACGATTGC AGTTGAATTT GAACACCCCG CAGCTCTGAT GCTTATGGCG CAACAGATTG AGCAAGGAGA GGGCAGTTAT CCCATGCCTG GTAGCCGAGC AACCGAAGCT CGAAAAACGT ATCTGAAAGC GGCGCAAACG GGCTATATCC CTGCGATAAG AAACTATATT CAACTTCTTG AAAATAAAGG TAAATACCAA GATGCCTATT ATTGGCGCCA GCAGGCAGTA CAGCGTGGCG ATCTCACTTC TTTGGTGGCG ATGGGCGGTA TTCTCAGTGG ACAGAGTGAG TTTTATCGTT TTGTCGAGCC TGATCTTAAG CAGGCCAAGG CTTACTTCAA TCGATATTTA GAAGTGGCAG GCAGCGATCG CTTGAGTCAT GTCTACCAAA ATAGCCAAAA GCAACTGCTC GATATTTCAA TGCAATTAAA TGGGCATGAG AAAGAAATTG CAGAGAAAAT AGAGCTTCAA CTCGAAAATT ATCAGCCTTT TTTCAACCAT GATGCTTACT GGGATAATTA G
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Protein sequence | MQQLSAQQAY ENGRLLRAQF KNLAAREYLK YAADLGEPNA AYLYAMEVAN YRTTIRTPPE SQHYLLLAAQ GGSRQAMRVL YQNGEWLRAA ERSLWQQTYY DTLIELGSRE PSQAAYELAL FHQKDNPKLA QHYLTIAVEF EHPAALMLMA QQIEQGEGSY PMPGSRATEA RKTYLKAAQT GYIPAIRNYI QLLENKGKYQ DAYYWRQQAV QRGDLTSLVA MGGILSGQSE FYRFVEPDLK QAKAYFNRYL EVAGSDRLSH VYQNSQKQLL DISMQLNGHE KEIAEKIELQ LENYQPFFNH DAYWDN
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