| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0031 |
|---|
| Symbol | |
|---|
| ID | 5134912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 35335 |
|---|
| End bp | 35646 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640530354 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001214872 |
|---|
| Protein GI | 147671915 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.841066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGA GCGAGCTGAA AATCACCGCC ACGGTGAAAA ACAAGCTGAC TGATGATGAG
AATGCCGAGC TTCCTGTTGA ACTCAATTTC AAATCCTTAG CCGACTTCGC TCCTGATGCG
GTGGCATCAC AAGTTCCAGA ACTGAAAAAA TTGATTGAGT TGCGTGAAGC GTTAGTTGCC
CTTAAAGGGC CGCTAGGCAA CATTCCCGCA TTTCGTGAGC GTTTACAGTC ATTACTCAAC
TCAGAAGAGT CGAGAGAAAA ACTGTTGGCA GAACTGAATC TGCTCAGTGG TCAAGAAGAG
CCACAAGCGT AA
|
|---|
| Protein sequence | MRESELKITA TVKNKLTDDE NAELPVELNF KSLADFAPDA VASQVPELKK LIELREALVA
LKGPLGNIPA FRERLQSLLN SEESREKLLA ELNLLSGQEE PQA
|
|---|
| |