| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0022 |
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| Symbol | |
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| ID | 5134419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 26545 |
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| End bp | 27318 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530345 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214863 |
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| Protein GI | 147671772 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.828521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGA GTAAAAAAGA GACGCCATTA GCCAGTTTGT TGTTCGACGA TGTGGAAAAA
ATTAACCACG ACCAAGACTA CTGGTTCCAA TTGCGTGGGG ACAATCCGAA TGTGCTGATT
GATGCCGCGA CACCCTTGTT TGGGCTTTCT CTGCGGGTTC GTACCCTCAC CGAATGCGAC
AACATTGAAC AGATCTACCG TCAGACGATT GAAGAGATCA AAGCGATTGA AATTGAGTTG
ACGGAGCAAG GTTACGAACA CGCCATTTTG ATGGCCTATC GCTACATCTT GTGCGCCTTT
TTGGATGAAT CCGTGATGGG AACCGAGTGG GGCGCGTCCA GTTTATGGGC CGAGCACTCC
ATGCTGTCAC GCTTCCATAA TGAAACGTGG GGTGGCGAGA AAGTGTTTAC GATTTTGAGC
CGTCTTGAGG GTGAACCACA CCGTTACCAA GCGCTATTGG CCTTTATTTA TCATTGCCTG
ATTTTGGGCT TTGAAGGCAA ATACCGTGTG ATGGAAGGGG GACAAGCTGA GCGCGAAAAA
GTGATCAGCC GCCTGCATCA ACTGCTGAGC AGCTTGGAAG AGAGCGAGCC ACAAGACTTA
ACCCGTCCGA CCGATCATGT GGTGCGTGCG AAATATACCC TAAGCAGACA GATGCCTGTT
TGGTCTGTGT TTGCTGGCTT TATCGTGCTT TGGGTAGGTC TATTTCTCGG CTACAGCTAT
GTACTGCATA GCAAATCCAG CGATGTGCTC AATCAACTCA ATCAAATACT TTAA
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| Protein sequence | MSQSKKETPL ASLLFDDVEK INHDQDYWFQ LRGDNPNVLI DAATPLFGLS LRVRTLTECD
NIEQIYRQTI EEIKAIEIEL TEQGYEHAIL MAYRYILCAF LDESVMGTEW GASSLWAEHS
MLSRFHNETW GGEKVFTILS RLEGEPHRYQ ALLAFIYHCL ILGFEGKYRV MEGGQAEREK
VISRLHQLLS SLEESEPQDL TRPTDHVVRA KYTLSRQMPV WSVFAGFIVL WVGLFLGYSY
VLHSKSSDVL NQLNQIL
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