| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0018 |
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| Symbol | |
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| ID | 5134386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 20243 |
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| End bp | 21652 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530341 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214859 |
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| Protein GI | 147672276 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA CTGAATACCG TCAGTGTGTG GCCAAACCGA TCAGCAGTAG CAATCCTGTC
GGAGAGCGGC TAGTCGATCA CCCACTGTTT GATTTTATTG AGGATCAGAT GATGAAAGTG
GGCTCTCTCT CTCACGCTTC AGTGCAGTGG GATGAAGTGG AGCACAGCAC TCTCAAACTG
CTTGGTGAAC AGAGTAAAGA CATCAAGCTT TTGGTTTACC TGCTGCAGTG TCTGCATAAC
CAAGTTACCC CGACGCGCCT TATTACCTCG TTTGCGGTGA TGAGTGAGTT CCTCAATCAA
TATTGGAACG ACAGTTATCC AGCGCCGGGC CCACGTGGCA ATCTGCCGCG ACGTAAATTT
TTCAGCCAGA TGGCGCAACG TTTTACCACG GTGATCGAAA AGTTCGATTT TCATCATCTG
GATGAAGCGG ATCGCCAAGC GCTACAAGCG GCGGTTGAAG AGTGGCAACA AGCCGTTGAG
AAACAAGGGC TCTCTTCTGA GTTGGTGGAG TCTGTGGTGG TGCGAATTAC CGCGGAGATC
AAACGCGCAG AGCAGCGCCA GCAAGTGACG GCGCAAAGCA GCGCGGAGCG TGAAACACCA
AGTGCTGCAA CGCCTTCTCC TGCGGCGAGT ATGGTGGTGG ATCATTCGAG TGACAAAGCA
GCGAAACAAA CCCTACTCAA AGTGGCAGAT TTTCTTGCCG AACAAGAGTT TGGTATCGCT
CTTTCGATTC GTCTGCGCCG CTTTGCGGTG TGGGGCAGCA TTACCTCATT GCCCGATCAT
AAACCCGATG GTGAAACACT GCTGCGTGGA ATGCAGGCGG ATCGCGTCAA GGATTACCAA
GATCAACTTC GTCACCCCGA TTTAGCCTTG TGGCGCAAAG TCGAACAGAG CTTAACCATG
GCTCCTTATT GGTTTGAAGG ACAGTGGATG AGTTACACCA TTGCCCAGCA ACTCGGCAAA
AGTGATTGGT GTCAGGCGAT TGCCGAAGAA ACACAACAGT TTTTACGTCG TTTGCCTTCG
CTGCTTGAGC TCAAATTCAA AGGCGGAGAG CCGTTTGTCA GCGATTCGGT CAAAGAGTGG
CTGGCGAGCG TAGGTCAGAG CCAAGGTGCT GCGGGGCAAT CGGTCGGCGG AGATTGGCAA
GAGAAGCGTA AAGAGGCGTT TCAACTGGCT AAAGAAGGTG GAATCGCGGT GGCACTTTCC
ATGCTCAATG ATGGCTTGGT CAGTGCGGTG GAGCCGCGAG ACAAATTTTA CTGGCGATTG
CTATCGGCAG ATCTGCTGCG GGCAAATCAT CTCGATGCGA TGGCTGGTGA ACAGTATCAA
ACTCTGCTCA ATCAGGTAAC GACGCTGTCT GTTCCTGAGT GGGAACCGAG TTTAGTGGAA
CAAATTCAAA GATATACAAC GTCAGAGTAA
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| Protein sequence | MEMTEYRQCV AKPISSSNPV GERLVDHPLF DFIEDQMMKV GSLSHASVQW DEVEHSTLKL
LGEQSKDIKL LVYLLQCLHN QVTPTRLITS FAVMSEFLNQ YWNDSYPAPG PRGNLPRRKF
FSQMAQRFTT VIEKFDFHHL DEADRQALQA AVEEWQQAVE KQGLSSELVE SVVVRITAEI
KRAEQRQQVT AQSSAERETP SAATPSPAAS MVVDHSSDKA AKQTLLKVAD FLAEQEFGIA
LSIRLRRFAV WGSITSLPDH KPDGETLLRG MQADRVKDYQ DQLRHPDLAL WRKVEQSLTM
APYWFEGQWM SYTIAQQLGK SDWCQAIAEE TQQFLRRLPS LLELKFKGGE PFVSDSVKEW
LASVGQSQGA AGQSVGGDWQ EKRKEAFQLA KEGGIAVALS MLNDGLVSAV EPRDKFYWRL
LSADLLRANH LDAMAGEQYQ TLLNQVTTLS VPEWEPSLVE QIQRYTTSE
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