| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0011 |
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| Symbol | rbsD |
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| ID | 5134586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 10595 |
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| End bp | 11014 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530334 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_001214852 |
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| Protein GI | 229259762 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA GTACCCTACT AAACTCTGAA CTCTCTTACT TGGTGGCAAC ACTCGGCCAT
ACCGATGAAA TCACGATCTG TGATGCTGGG CTGCCAATCC CTGATGAAGT GACGCGTATT
GATCTCGCGC TGACTCACGG GGTGCCTTCT TTTTTGGAAA CAGTACGGGT GATTTTGTCT
GAATCGCAGA TTGAAAGTGT CATCGTGGCA CAGGAGTTTG CTCAAGTAAG CCCGGTGTTG
CATGAAGCCT TATATCGCGA GCTGAAAGCA GAAGAACAGT TGTGCGGTAA GCCAATTGCC
ATCCAATACA TCAGCCATGA AGCGTTTAAA CAACGCACGC TGCAAAGCCG CGCGGTAGTG
CGCACCGGTG AATGTACACC TTACGCCAAT GTGATTTTCC AAGCGGGTGT CGTGTTTTAA
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| Protein sequence | MKKSTLLNSE LSYLVATLGH TDEITICDAG LPIPDEVTRI DLALTHGVPS FLETVRVILS
ESQIESVIVA QEFAQVSPVL HEALYRELKA EEQLCGKPIA IQYISHEAFK QRTLQSRAVV
RTGECTPYAN VIFQAGVVF
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