| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0008 |
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| Symbol | rbsB |
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| ID | 5134823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 7129 |
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| End bp | 8013 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530331 |
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| Product | D-ribose transporter subunit RbsB |
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| Protein accession | YP_001214849 |
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| Protein GI | 147671798 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGA AAAAACTGAC CACTCTTATC TCTGCTGCTC TACTTTCCAC TTCGGTTTCT
TTTGTTGCGC AAGCGCAAGA TACCGTGGCG ATTGTTCTTT CAACGCTGAA CAACCCGTTT
TTCGTGACCA TGAAGGATGG AGCCGAAGCG AAAGCCAAAG AACTTGGCTA CAACCTGATT
GTGCTGGACT CGCAAAATGA CCCAAGCAAA GAGCTTTCGA ACGTGGAAGA CCTTACTGTG
CGCGGCGTGA AAGCGATTCT GATCAACCCG ACTGATTCGG ATGCGGTTTC TAACGCGATT
CGTATCGCGA ACCGCTCCAA GATCCCAGTG CTGACGCTTG ACCGTGGCGC GAGCCGTGGT
GAGGTAGTGA GCCACATTGC GTCCGATAAC GTAGTCGGCG GCGAAATGGC AGGCCATTTT
ATTGAAGCGA AAATTGGTAG CGATGCCAAA GTGATCCAAC TGGAAGGCAT CGCCGGAACT
TCAGCGGCGC GTGAGCGTGG TGAAGGTTTC ATGAATGCAG TGAAAGGCAG CAAGATGCAA
CTGCTGGCTA GCCAACCTGC GGATTTCGAC CGCACTAAAG GTTTGAACGT AATGGAAAAC
CTACTGGCAG CGAACCCTGA TGTTCAAGCG GTTTTCGCGC AAAACGATGA AATGGCATTG
GGTGCACTGC GTGCAATTCA AGCGTCAGGC AAGTCGGTGA TGATTGTTGG CTTTGATGGC
ACCGATGATG GCATCGCAGC GGTAGAGCGC GGTCAATTAG CCGCCACTGT CGCACAGCAG
CCAGACATGA TTGGCGCGAT TGGTATTGAA ACTGCCGACA AAATGCTCAA GGGTGAAAAA
GTGGAAGCTT ACATCCCAGT CGCTCTGAAA GTGATTGCAA AATAA
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| Protein sequence | MRMKKLTTLI SAALLSTSVS FVAQAQDTVA IVLSTLNNPF FVTMKDGAEA KAKELGYNLI
VLDSQNDPSK ELSNVEDLTV RGVKAILINP TDSDAVSNAI RIANRSKIPV LTLDRGASRG
EVVSHIASDN VVGGEMAGHF IEAKIGSDAK VIQLEGIAGT SAARERGEGF MNAVKGSKMQ
LLASQPADFD RTKGLNVMEN LLAANPDVQA VFAQNDEMAL GALRAIQASG KSVMIVGFDG
TDDGIAAVER GQLAATVAQQ PDMIGAIGIE TADKMLKGEK VEAYIPVALK VIAK
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