| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1372 |
|---|
| Symbol | |
|---|
| ID | 5132288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 1326341 |
|---|
| End bp | 1328044 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640530308 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001214827 |
|---|
| Protein GI | 147670009 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGAAT TAGGCTCCAG CTTCGGGTTG GACTTAATCA TTGTTCTGGT GGCGGCTGTT
CTGGCCGGGT TACTTGCACG CCGCTTCAAA CTGCCCCTTT TACTGGGTTA TCTGGGGGCG
GGTATAGCCA TAGGCCCAAA CGGTTTCGGG CTGGTACAGT CTCCGGGTGT AATTGAATCT
ATGGCTACAG TCGGGGTAAT TCTGCTCCTT TTTACACTGG GGCTGGATTT TTCGCTGGAT
GAACTCAAAC GGGTAGGACG GGTGGCGGTG CTGGGCGGTC TTATCCAGAT AATTGTGACT
GCCGGATTTG GCTTTTTGCT GGGCAGAAGT CTGGGCTGGG ATATAAATGC CTCTATCTTC
TTCGGGTTTA TGGTCTCACT TTCCTCTACC CTGATAGTCC TTAAGATACT TATGGACAGG
GGCGAAATGG AAGCCCCTCA CGGGCGGGTG ATGCTGGGTA TTTTGCTGGT GCAGGATATT
TGCCTTATTC CCCTGATGAT TATTTTACCG GCTTTGGGGG GTGACGGCGG GGATATCGGC
TTTACCATGG GCATTGCCTT TGCCAAAGCC ACAGCCTTTA TTCTGGCTAT GTTTGCACTG
GGTTTCTGGG TTTTCCCCCG TTTGCTGGGG AGAGTGGCTT CCCATTCCCA CGAGCTTTTT
TTGCTGTCCG TTATCACCTT GTCTCTGGGG GCGGCCATGG GGGCAACTGC GCTGGGGCTT
TCACCGGCGG TAGGTGCTTT TATAGCCGGA CTTCTTATAG GACAGTCCAT GTATGCAAAG
CAGGCATTGG CAGATATAAT TCCCCTGCGG GATATTTTCG GGGCTTTGTT CTTTGTTTCT
CTGGGTATGC TGGCTAACTT GAACTTTGCG GTGGAAAACA TGGGTTTGGT TCTGCTGGTA
GTGGCCTTTC TGGTGGTTAT CAAGAGTCTG GTGGCCGGGG TGGTGCCATG GCTTTTCGGC
TATACCTTCC AGACGTCTTT TACTACCGGT ATCGGCCTGA TGCAGATAGG TGAATTCAGT
TTTGTACTAG CCGGGGTAGG TCTGGCCGCA TCGGTCATTA CAGACAGCAT TTACGCCATT
ACTATCAGCG CTGCGGTTAT TACCATGATA ATCACTCCTT TTGCCTTAAG TTTCAGCGGT
GCGGCCTACC GGAAGGTCAG CCAGTGGCCA CTAGCCAGCA AACTGGTCAG CCTGCGTACC
TCCGGGCAGA CGGAATATAA GGATTTGGAT ATTTCCAACC ATGCGGTTAT CTGTTCGCAA
GGGGGTGTAG CCAAGACCCT GACCCGTGTG ATGAGCCGCC GAAATTTCCC CTTTCTGGTT
ATAGATTTAG ACCCCCAGAC CATAGCTGAA CTTCGCCGCC AGAAAGCTCC CGCCATATAC
GGTGATGCCG CCAATCCGGA AATACTCAAA TTTGCCCGCT TGGATAAAGC CCGCCTGCTT
ATTTGTGCCA TGCCCGGTTT TGCAGATACT GAACAGGTAG TCAAAAATGC CCGCAAGATA
AATTCGCGGC TGGATATTGT AGCCAGAGTA ACCAGTGACA TGCAGGCGGA AAAACTTAAA
AAAATGGGCG TTAGCGAGGT TGTCCAACCC GAATTTGAAG TAGGTCTGGA ACTCTCCCGC
CACGCCATGC ACCGCTTCGG CATGACTACT ATTGAAATCC AGTACATTTT GAACAGCCTG
CGGAATATGG GCAAACCAGA GTAG
|
|---|
| Protein sequence | MEELGSSFGL DLIIVLVAAV LAGLLARRFK LPLLLGYLGA GIAIGPNGFG LVQSPGVIES
MATVGVILLL FTLGLDFSLD ELKRVGRVAV LGGLIQIIVT AGFGFLLGRS LGWDINASIF
FGFMVSLSST LIVLKILMDR GEMEAPHGRV MLGILLVQDI CLIPLMIILP ALGGDGGDIG
FTMGIAFAKA TAFILAMFAL GFWVFPRLLG RVASHSHELF LLSVITLSLG AAMGATALGL
SPAVGAFIAG LLIGQSMYAK QALADIIPLR DIFGALFFVS LGMLANLNFA VENMGLVLLV
VAFLVVIKSL VAGVVPWLFG YTFQTSFTTG IGLMQIGEFS FVLAGVGLAA SVITDSIYAI
TISAAVITMI ITPFALSFSG AAYRKVSQWP LASKLVSLRT SGQTEYKDLD ISNHAVICSQ
GGVAKTLTRV MSRRNFPFLV IDLDPQTIAE LRRQKAPAIY GDAANPEILK FARLDKARLL
ICAMPGFADT EQVVKNARKI NSRLDIVARV TSDMQAEKLK KMGVSEVVQP EFEVGLELSR
HAMHRFGMTT IEIQYILNSL RNMGKPE
|
|---|
| |