| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1342 |
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| Symbol | |
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| ID | 5132190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1303413 |
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| End bp | 1304447 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530277 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001214797 |
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| Protein GI | 147669979 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000274029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAATA AACTAACCAG AAGAGACTTT ATCAGGATTT CAGCCGTAGG TGCCGGGGTT
TTAGCTGCCG GCGGTTTAGG GGTTAAGGAG CTGATTACCT CGGCGGCTGA ATGCCAGTAT
TCTGAAACCA AAGCTCTTTT GGGAACCTAT ATAACAATTA CCCTGATAGA TAGTGGTCAG
GACAGCGCCA AAGCCAAGGT CAAAGATACC TTTGCCGAAA TTGAGCGGTT GTCTTCTGTA
TTTAACCGTT TTGATATAAC CTCAGAGCTT TACCGCCTGA ACAGGAGCGG TCAGGCCATA
GGTGCTTCAA GCGAATTCGT ATCCGTTCTT TCCAATGCCC GGTATTGTGC CGAGCTTAGC
GGCGGGGCAT TTGACCCGAC TGTACTGCCT GCCTTGGACC TCTGTCAGGA CAGCTTTGCC
AAAACCAAAC TGCCTCCCTC TTCCGCCCAG CTTGCTGAAG TAAAACATCT GGTTGATTAC
AGGGAAATGT CTATCAAAGG CAAGGATATA GTTTTGGGCA GGAACGGCAT GGCCATTACT
CTGGATGGTA TTGCCAAGGG TTATATTGTA GACATGGCTA GTTCCTATCT GCGCGGGCGG
GGTGTCAGCC AGATAATAGT TGAAGCCGGT GGAGATTTGG CTCTTCAGGG CATGCGTGAA
GACGGCCAGC CTTGGAAAGT AGGCATCACC CACCCCAGAG CTTTTACCGG TTATTATGAT
GTTATCCAGT CTTCAAATGC CTGCATGGCT ACTTCCGGTG ATTATGAAAA CGCATTTACC
CCGGATTATA AGTATAACCA CATTATTGAC CCCGGTACCG GGTTCTCACC TCAGGAACTG
TGCAGTGCCA CTGTTATTGC CCGTGATACT CTGCTGGCTG ATGCTTTAGC TACAGCTGCC
ATGGTAATGG GAGTGGATGA GACCCTTAAG CTGCTTGAAA GTCTGGACGG GGCAGAAGCC
CTGCTTATTG GCAAAGACCT TAAGAGTTAT ACAACCAGTG GTTATCGTGC CCTTAGTGAA
CATCTCAGCA CCTGA
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| Protein sequence | MKNKLTRRDF IRISAVGAGV LAAGGLGVKE LITSAAECQY SETKALLGTY ITITLIDSGQ
DSAKAKVKDT FAEIERLSSV FNRFDITSEL YRLNRSGQAI GASSEFVSVL SNARYCAELS
GGAFDPTVLP ALDLCQDSFA KTKLPPSSAQ LAEVKHLVDY REMSIKGKDI VLGRNGMAIT
LDGIAKGYIV DMASSYLRGR GVSQIIVEAG GDLALQGMRE DGQPWKVGIT HPRAFTGYYD
VIQSSNACMA TSGDYENAFT PDYKYNHIID PGTGFSPQEL CSATVIARDT LLADALATAA
MVMGVDETLK LLESLDGAEA LLIGKDLKSY TTSGYRALSE HLST
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