Gene DehaBAV1_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_1341 
Symbol 
ID5132197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp1302768 
End bp1303214 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID640530276 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001214796 
Protein GI147669978 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000130436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGT CAGCCCGCGG CAGGCATTCC ATGGAGGCCA TGTTTGACCT GGCGGTTCAT 
TACGGTGAAG GCCCTATTTT GATTCGTGAC GTCGCTCAGC GGCGAAAGAT ATCTGAACAG 
TATCTGGCTC AGCTTTTTAT CCCTTTGCGG ATAGCAGGGT TGGTCAGGAG TGTTCGTGGG 
GCAAACGGCG GTTTTGTACT GGCCAGAGAT CCTAAAGAGA TAAAACTGAG TGATATTGTA 
AAGGCTACCG AAGGATCTAC CTCCCCTTCA GAGTGTGTAG ATGACCCTAG GGTTTGCTGG 
CGTGGTGAGG GTTGTATAAC CCGCAATGTC TGGCTCAGAA TAAAAAAAGC TACCGATGAA 
ATTTTGGATT CTATAAATTT AGATAATCTG GTACAGCAGT GGAAAGAAAG CGGTTCACCT 
GAAGTTCCTC TGGAGCTGAG CATTTAA
 
Protein sequence
MKLSARGRHS MEAMFDLAVH YGEGPILIRD VAQRRKISEQ YLAQLFIPLR IAGLVRSVRG 
ANGGFVLARD PKEIKLSDIV KATEGSTSPS ECVDDPRVCW RGEGCITRNV WLRIKKATDE 
ILDSINLDNL VQQWKESGSP EVPLELSI