Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1321 |
Symbol | |
ID | 5132233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1285739 |
End bp | 1287673 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530255 |
Product | hydrogenase membrane subunit |
Protein accession | YP_001214776 |
Protein GI | 147669958 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGCGG GTTTATTGCT TGGCGGAGGG TTTTTACTTC TGGCCGCTGC CCTGACGGGC ATTGTGTTTA ATCATGGCAG TAAAAAAGTC TGGCAAGGGG TACTATGGCT GGTTATAGCG GCGGCGCTAT GCTTGCTTAT TGGGTCTTTG CAGATATTTT TCGGTAATCC GCTGGATATT TCCCTCTGGA GCATTGCATC CGGGCTGGAC ATAGCCTTTC ATCTTGACCG TCTGGCATCA TTCTTCGTCA TAATAATTAG CCTTATTTCA CTCTGCGTGG CCGTGTATTC ACTGGGCTAC AATAACCATA TATCTTCAAA CGAACGAGCC AATCTGCTCT CAGCCTTTAT GGCTGTTTTC ATTCTCTCCA TGATAGGCGT GGTGGCCTCG GCCAATACCT TTAGCCTGAT ATTTTTCTGG GAGATAATGG CCCTAAGCTC CTTCTTTTTA ATGATGAATG ACTATCAGGA GCCTTTTACC CAGCGGGCGG GCGTGTATTA TTTCGTGCTT ACCCAGCTTA GCACCATTTT CCTGATGCTG ATGGCAGTAG TTATGTATAT CCAGAACGGC AGTTTCGCAC TCAGCCTGAG CGGTGCATCC TCCGTCATCC AGAGTCTGGT TTTTGTTCTG GCATTTCTGG CCTTCGGAAT CAAGGCCGGT ATCATACCCC TTCACAAGTG GCTGCCTTAT GCCCACTCTG CCAGCCCTTC AAATGTCTCT GCCCTGATGT CCGGGGTAAT GCTGAAAGTG GCCATTTACG GCTTGGTACG CTTTCTTATG GATGTGCTTA GCCCGGAAAT GTGGTGGGGT GTGGGAATAC TCCTTTTGGG CATGATAAGT GCCTTGCTTG GTATTATCTA CGCCTTTAAA GAACATGACC TTAAAATGCT GCTGGCTTTT TGTAGTATTG AAAATATCGG CATTATCCTG ATGGGTATTG GTCTGTATGT TATTTTTGGC TTGTATGGTC TGGATACGCT GGCTATGCTG GCACTTGGTT CAGCTTTGTT TCACAGCCTG AATCATGCCA TTTTTAAAAG CCTGCTTTTT ATGACCGCCG GTTCGGTGGT AATTGCCGTG GGTGACCGCA ATATTGAAAA AATGGGCGGG TTGATTAAAC TAATGCCCTA CACTTCTGTT ATCTTTCTGG TGGGGGCAGT TTCCATATCG GCTTTGCCTC CCTTCAATGG TTTTATGAGT GAGCTGATGC TCTTTGAGTC TTTTTTCCAG TCCTTCTCTC TGGCTGAAAG CAGTATAAAG ATACTTCTGT TCAGTGTACT GGCCATACTG GCTCTTACTT CAGCTCTGGC GGCCGCTTGC TTTGTAAAGG CCTTCGGGAC GGTCTTTCTG GCTATGCCTC GCAGTCAGGA AGCAGCCTCT GCCAAAGAAG TTTCAAAAAG TATGATTATA GGGCCGGCCA TACTGGCAGT TGCCTGTCTG GTATTGGGTC TGTTTGCTGT CCAGATATTT TCGGTAGCCG GATATAGTTT TGACCTGCCG GATATGTCAC TGGTTGGCTT GGTACTGGTT ATCTTCGGGG TTTTGGTTTT CGGCATGGTC AGGCTGTTTT CGCCCCGAAA AAGCCGCCGG AGCGAGACCT GGGCTTGCGG CTATGTTCGC CCAACTCCCC GCTTTGAGTA TACTGCCTCC GGTTTTGCCG AGCCCCTTTT CCAGATATTC CGGCTGATAT ACCGCACCCG CCATTACAAT GAACGCAGTT ACGAAGATAA CCAGCAGGCT ATTTTCAAAC AGGGCAAATC AGCTATTCAC ACCATAAAGT TTTTTGATGA GTATATTTAT CTGCCGGTTG CCGGTTTGTT CGGGCGTATT TCCCGTTTCA TATCCCGCCT GCAGGATGTT GATTTGGGCA GCCATATCCT GTACAGCTTT ATAACTGTTT TGCTGGTTAT ACTGGCGGCA AGGTGGCTGT GGTGA
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Protein sequence | MIAGLLLGGG FLLLAAALTG IVFNHGSKKV WQGVLWLVIA AALCLLIGSL QIFFGNPLDI SLWSIASGLD IAFHLDRLAS FFVIIISLIS LCVAVYSLGY NNHISSNERA NLLSAFMAVF ILSMIGVVAS ANTFSLIFFW EIMALSSFFL MMNDYQEPFT QRAGVYYFVL TQLSTIFLML MAVVMYIQNG SFALSLSGAS SVIQSLVFVL AFLAFGIKAG IIPLHKWLPY AHSASPSNVS ALMSGVMLKV AIYGLVRFLM DVLSPEMWWG VGILLLGMIS ALLGIIYAFK EHDLKMLLAF CSIENIGIIL MGIGLYVIFG LYGLDTLAML ALGSALFHSL NHAIFKSLLF MTAGSVVIAV GDRNIEKMGG LIKLMPYTSV IFLVGAVSIS ALPPFNGFMS ELMLFESFFQ SFSLAESSIK ILLFSVLAIL ALTSALAAAC FVKAFGTVFL AMPRSQEAAS AKEVSKSMII GPAILAVACL VLGLFAVQIF SVAGYSFDLP DMSLVGLVLV IFGVLVFGMV RLFSPRKSRR SETWACGYVR PTPRFEYTAS GFAEPLFQIF RLIYRTRHYN ERSYEDNQQA IFKQGKSAIH TIKFFDEYIY LPVAGLFGRI SRFISRLQDV DLGSHILYSF ITVLLVILAA RWLW
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