Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1296 |
Symbol | smpB |
ID | 5132293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1266227 |
End bp | 1266775 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530230 |
Product | SsrA-binding protein |
Protein accession | YP_001214753 |
Protein GI | 147669935 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000870079 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGGG ATACTCTCTG TCAAGCGCCA ATGCATTATG CCCGGATTGT AAGCAATCTG CGTCTGGGGT ATGATATAAT ACATATGGCA GAATACGTAA CCCTGACAAC TAACCGCAAG GCATTTCACA ACTATTTCCT GGAAGAAAAA TACGAAGCCG GGATAATGCT GCTGGGCACG GAGATAAAAT CCCTCCGAAG CGGCAGAGTA AACATGGGAG ATGCCTATGT AAAGCCCCAG AGGGGTGAAC TCTGGCTGGT AAATGCCCAT ATTTCAGCCT ACGAGTGCAG CGGACATACC AGCCATGAAC CAATGCGGGA ACGCAAACTG CTGATGCACC GCAAGGAAAT AGTCCTGCTC ATGTCAAAGG TCAAAGAAAA AGGGCTGACA CTGATACCGG TTCGTATTTA CCTAAAAAAC GATATCGCCA AGGTAGAGCT GTCACTGGGG CGGGGTAAGA AGCTCTATGA CAAAAGGGAT ACCGTAACCA AGCGGGACAC CGAACGCGAA CTTGAGCGGG AGGTCAAATA CCGCAATTTC CGCCGCTAG
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Protein sequence | MTGDTLCQAP MHYARIVSNL RLGYDIIHMA EYVTLTTNRK AFHNYFLEEK YEAGIMLLGT EIKSLRSGRV NMGDAYVKPQ RGELWLVNAH ISAYECSGHT SHEPMRERKL LMHRKEIVLL MSKVKEKGLT LIPVRIYLKN DIAKVELSLG RGKKLYDKRD TVTKRDTERE LEREVKYRNF RR
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