Gene DehaBAV1_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_1279 
Symbol 
ID5131675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand+ 
Start bp1252036 
End bp1252623 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content50% 
IMG OID640530213 
Productthymidylate synthase, flavin-dependent 
Protein accessionYP_001214736 
Protein GI147669918 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1351] Predicted alternative thymidylate synthase 
TIGRFAM ID[TIGR02170] thymidylate synthase, flavin-dependent 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATA ACGTAGAAGT AAAACTGCTG GCCATTACTC CGGATGCCGA AAATCTGGCA 
GAACAAGCCG GACGGCTTTG TTACGCCAGC GGCAATAAAC TTGGCAGCAG CCAGGACTGG 
CTTCAGACAC GCATCAAACA AGGGCACGAA AGCCTGCTTG AGCATGTTTC GGCCACTTTT 
TATATAAAAG CCTCACGGGT GGTTACCCAT GAGCTGGTCA GACACCGTAT TGGCAGTTAC 
TCCCAGCGAA GCCAGCGTTA CGTTAAGGAA AATCAAGCCG AGTTTATCAC CCCGCCTGAA 
ATTACCGAAG GAGATAGTGC CAAACTAGCG CTGTTCAATC AGGCTATGGA AAGCGCTTGG 
GATTCCTACC GCAAACTGCT GGAAGCGGGT ATAAAGCCTG AAATAGCCCG TTACGTACTG 
CCCAATGCCT GTGCCACCGA GATTATCTGC ACCTGGAATT TCCGCGAACT GCGGCATATT 
TTGAAACTGC GCACTGCCCC GTCCGCCCAG CCTGAAATGA GGGTAGTCGC TAACCGAATC 
CAAGAGATAC TAAAAAAAGA AGCCCCCAAG ATATTCGGAG ACCTCTAA
 
Protein sequence
MEYNVEVKLL AITPDAENLA EQAGRLCYAS GNKLGSSQDW LQTRIKQGHE SLLEHVSATF 
YIKASRVVTH ELVRHRIGSY SQRSQRYVKE NQAEFITPPE ITEGDSAKLA LFNQAMESAW 
DSYRKLLEAG IKPEIARYVL PNACATEIIC TWNFRELRHI LKLRTAPSAQ PEMRVVANRI 
QEILKKEAPK IFGDL