Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1237 |
Symbol | |
ID | 5132127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1217933 |
End bp | 1219192 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530163 |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_001214694 |
Protein GI | 147669876 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATGAAT TAAGTGTTTT GCCAAGCGGC CTTCGGGTGA TAAGCTACCA CATGCCTGCC AGCCGTTCGG TTACCATTTG CGTATATATA GGGGTGGGTT CACGTTATGA AAAAGACTGT GAAGCCGGCG CCAGCCATTT TATAGAGCAC ATGGTATTTA GAGGGAGTGC CAAGTACCCC AATTCCCAGC TTATTTCCAG CGCCATAGAG GGGGTGGGTG GTATTTTGAA TGCGGCTACC GACCGTGAGT CCACCCTTTA CTACGCCAAA GTGGGCAGTG ACAAATTTGC TCTGGCACTG GATGTGCTTT CGGATATGCT GGTAACCCCT GTGTTTGATC CTGAAGACCT TGAGAAAGAA CGTAAGGTTG TCTACGAAGA GATAAGCATG AGCATGGACA ACCCTTCCCA CCGGGTAGGA CTGCTGATTG ACGAAATACT CTGGCCGAAT CACCCTTTGG GCAGGGATAT AGCCGGCAGC CGCCAGAGTG TGGCAGGTCT GGACAGACAG AGACTGCTTA GTTTCATGCA TTGCCATTAT AACCCGGCCA ATGTAGTGGT GGCAGTAGCC GGAGATATAA AGCACGCACC CGCGGTTTCG GCTATCAGTC AGGCCTTCAG CGGTTTGGGC GGTCAGAATA TAGTTCAGAC TTTTGAACCT TATCATTCCG GCAACCCCTG TCCGGTAGGG GTAGACAAAA GGGATGCAGA GCAGATTAAC CTGATGCTGG CAATGCCGGG TATGAACCGG CTGGATAACC GCCGTTATGC TTTCAGTATA CTAAATACCA TACTGGGTGA CGGCATGAGT AGCCGTCTCT TTGCCCATGT CAGGGATAAT CTGGGTTTGG CTTATTCTGT CCAGTCCGGT ACTGAGTTCC TGCATGATAC AGGGGCTTTT TCCATATTTG CCGCTGTAGA CCCCGCAAAT CTGACGGCCT GCATAGAGGC TATACTTTCG GAGATGGAAG CCGCCAAGAC AACTATAACC GCAGAAGAGT TGACAAAGGC TAAGGAAATG TCCAAGGGGC GGATTCAGCT GGCTATGGAA GACAGCCGCT ATATGGCCAA ATGGATAGGC TCTCAGGAAT TGTTATGCCG AAGGGTAAAC ACCCATGAAG ATGTTATCCG CCTGATAGAC GGGGTGACCC TGACAAGCGT AATGGAACTG GCAGGGGAGT ATTTCAGGAA ACCTGAGATG CGGCTGGCTC TGGTGGGGCA GATTGATAAA GAAAAGGTGA GCTGTTTACT GAAAGACTAG
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Protein sequence | MYELSVLPSG LRVISYHMPA SRSVTICVYI GVGSRYEKDC EAGASHFIEH MVFRGSAKYP NSQLISSAIE GVGGILNAAT DRESTLYYAK VGSDKFALAL DVLSDMLVTP VFDPEDLEKE RKVVYEEISM SMDNPSHRVG LLIDEILWPN HPLGRDIAGS RQSVAGLDRQ RLLSFMHCHY NPANVVVAVA GDIKHAPAVS AISQAFSGLG GQNIVQTFEP YHSGNPCPVG VDKRDAEQIN LMLAMPGMNR LDNRRYAFSI LNTILGDGMS SRLFAHVRDN LGLAYSVQSG TEFLHDTGAF SIFAAVDPAN LTACIEAILS EMEAAKTTIT AEELTKAKEM SKGRIQLAME DSRYMAKWIG SQELLCRRVN THEDVIRLID GVTLTSVMEL AGEYFRKPEM RLALVGQIDK EKVSCLLKD
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