Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1222 |
Symbol | |
ID | 5131068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1202111 |
End bp | 1203529 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530148 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001214679 |
Protein GI | 147669861 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.433131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCATGAAT CTTGCGGCGT TTTCGGTGTA TTTGCCCCCG GTCAGGATGT AGCCCGACTC ACATTTTTCG CTCTGTTTGC CTTGCAGCAC AGAGGGCAGG AAAGTTCAGG CATATCTACA TCTGATGGAC AGGAGCTTAA TCTTCATTCC CAGATGGGTC TGGTTTCCCA TATTTTCACT GAAGATATAC TTAAAAAACT GGACGGCCAT ATTGCCATAG GCCACAACCG CTATTCCACC ACCGGTTCAA GCCAGCAGAT TAACGCCCAG CCCTTTGTAA TGGGGCAGGG AGATAATGTT ATAGCCATAG CCCATAATGG CAACATCGTA AATTCCGAAG CTTTGAATAC AGAACTTACC TCTCAGGGAT ACACCTTTAA GACATCCACT GATACCGAAA TAATCAGCCA GCTTATCCTT TCATCTATTG AAACTGACTG GGTCAAACGG ATACGTTATG CCATGAACCG CCTGAAAGGG GCTTTTTCCT GCACCCTTAT GACCAAAGAC ACCCTATTTG CCATGCGTGA CTCACTGGGT GTCCGTCCCC TGTGCTTGGG TAAAATTCAG GGCGGTTATG TAGTCGCTTC TGAAAGCTGT GCTCTTGACC ATATCGGAGC TGATTTCGTG CGTGAAATAG AGCCGGGCGA GATTGTAGCT ATAAACGGAA ACGGCATAAC CAGTTTTAAA CAGCAAAGCT CCAGACGGGC TTTGTGTATA TTTGAGTTCA TTTATTTTGC CCGCCCCGAT AGCCTGATAG ACGGGCGTCT TTTGTATTCC GCCCGCCAAG CCATGGGGGT AGAACTGGCC AAAGAATACC CGGTAGATGC AGACCTGGTT ATAGGCGTAC CTGACTCTGC CACGGCTGCC GGTATCGGCT ATGCCGTAGG TTCAGGCATT CCTCCAGCCG AAGGCCTTAT TAAAAACCGC TACATGGGGC GAACCTTTAT TCAGCCTGAC CAGCGTCTGC GTGATTTGGG CGTGAAACTA AAGTTCAATC CCCTTAAGAG CGTTCTGGAA GGTAAGCGGG TAGTACTGGT AGATGACAGC ATAGTCCGGG GAACTACCAC CCCACAGGTT ATCCGCCTGT TACGTAAAGC CGGCGCCAAA GAAGTCCATA TGCGGGTATG CGCACCCCCC ATAACCAACC CATGTTTCTT CGGGGTAGAT ATGGCCACCC GTTCAGAACT TATTGCCGCC AGAATGAGCA TACCTGAGAT ACAAAAATAC ATAGGTGCAG ATTCACTTGG CTATCTTAGC CTGCCCGGGT TGATAAATGC CGTGGGGCTG CCTGAGAAGA ATTTCTGTCT GGCCTGTTTC ACCGGCGAAT ATGCCCTGCC AGTTCAACTG GAAATGGATA AATTTGCACT TGGCAATCAA CGACACAACT GTTGCCAGAT GCCTTCACCC GAAAGCTAG
|
Protein sequence | MHESCGVFGV FAPGQDVARL TFFALFALQH RGQESSGIST SDGQELNLHS QMGLVSHIFT EDILKKLDGH IAIGHNRYST TGSSQQINAQ PFVMGQGDNV IAIAHNGNIV NSEALNTELT SQGYTFKTST DTEIISQLIL SSIETDWVKR IRYAMNRLKG AFSCTLMTKD TLFAMRDSLG VRPLCLGKIQ GGYVVASESC ALDHIGADFV REIEPGEIVA INGNGITSFK QQSSRRALCI FEFIYFARPD SLIDGRLLYS ARQAMGVELA KEYPVDADLV IGVPDSATAA GIGYAVGSGI PPAEGLIKNR YMGRTFIQPD QRLRDLGVKL KFNPLKSVLE GKRVVLVDDS IVRGTTTPQV IRLLRKAGAK EVHMRVCAPP ITNPCFFGVD MATRSELIAA RMSIPEIQKY IGADSLGYLS LPGLINAVGL PEKNFCLACF TGEYALPVQL EMDKFALGNQ RHNCCQMPSP ES
|
| |