Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1201 |
Symbol | |
ID | 5131530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1176411 |
End bp | 1176857 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640530127 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001214658 |
Protein GI | 147669840 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.069675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTCA AACGTAGTCT GACCGCCGTA CTGGCGTTAT GCATGGTATT TACTGGAACT CTGACAGGTT GTGATACAGA TAGAACTGAC CCTTTAGATA ATACTGATAG TAATTTGACT AAGGTGCAGG ATATATCTGT TGCAGAAGCC AAAGACCTTA TAGACCGGAA TACCAACTCA ACTGAATTTG TTATTTTAGA TGTGCGTACC CCCTCCGAAT ATGCTCAAGG GCATATTGCC GGTGCTGTAA ATCTGGATTA TTATGCTTCC TTTGAAAATT CGCTTTTCGC TTTGGATAAA AATAAAACTT ACCTTGTCTA TTGCCGTTCA GGTAACCGCT CTGTCTCTGC CTCCCAGCTT ATGGTGGATA ATGGCTTTAC CAGCATATAT AACATGCTGG GCGGTATAAA CGTCTGGATT GCGAATGGAC TGCCGCTGGC AACCTAG
|
Protein sequence | MSFKRSLTAV LALCMVFTGT LTGCDTDRTD PLDNTDSNLT KVQDISVAEA KDLIDRNTNS TEFVILDVRT PSEYAQGHIA GAVNLDYYAS FENSLFALDK NKTYLVYCRS GNRSVSASQL MVDNGFTSIY NMLGGINVWI ANGLPLAT
|
| |