| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1200 |
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| Symbol | |
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| ID | 5131526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1173537 |
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| End bp | 1176248 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530126 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001214657 |
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| Protein GI | 147669839 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC CTGTAATTGT CCTTTTTGAC GGCACAAATC TGGTTCATCG GGCATATCAT
GTACTGCCAC CTCTTACAGT CCGCAAAACA GGTGAAGTGG TGGGGGCGGC TTTTGGTTTT
GCCTCTATAC TTATAAAAGT CTTAACCGAC CTGAAACCGG ATTGTTACGC TATATCCTTT
GATAAAAAAG GCCCTACCTT CAGGCATGAG ATGTTCAAGG ACTACAAAGC CCAACGTCCG
CCCATGCCTG ACGAGCTTGT CAGCCAGCTG GGACGGGTAC GCCAGATTGT GGATGCTTTC
AATATGCCTG TATACGAACA GAGCGGTTTT GAGGCAGATG ATGTGCTGGG CACACTGGCT
ACCAGAGCCG CCGCCGAAGG CATGGAGGTT ATAATAGCCT CCGGAGACGC AGACTCCATG
CAGTTGGTCA GTCCGGATAT TCGTATTCTG TATCCCGGCC CGGCCGGTTC TTTTTCCAAT
ACCAGTCTGT ATGACGAGGC GGCAGTAAGG GCAAAGTACG GTTTAGGGCC GGAGCATGTC
GCAGATTACA AAGCCCTTAT GGGTGATCCG TCTGACAACA TACCCGGAGT ACCCGGCATA
GGCCCGAAAA CTGCCCAGAA ACTTATAGAA GAATACGGCG GCATAGAAGA TATATATAAA
AATCTGGATA AAATAAGCCC GCCCGGTCTC CAAAAGAAAC TGGCAGACAA CGCCGAAGTA
GCCCGCCAGA GTAAAATATT AACTACGATT GTGTGTGATC TGCCGCTGGA TTTCAGTATT
CAGGAATGTA GATCGGAACA CTATAACCGC CAAAAGGTGG TAGACCTTTT TCGTGAACTG
GAGTTTTTCA GGCTGATTCA CCGCCTGCCA GGCGGTGAAA ATCCTGGCGG CGGTATGACA
GATATGTTTA ACACCCCCCA AAAGGTTGAA ACCCGCTATA TTATAGCCAA CGGGCAGAAT
CTAGACAGCA TCGTGAAGCG GCTCACGGAA ACCAAAGAGC TGGCACTGGC AGTTTCGGGC
ACTTCCGAAG AAGCTATAGA TGCCCGCCTG ACTGCGCTGG CAATTTCACC GGCAGAGGGC
GAAGCCTATT TTATTTCTGC AGAATTTATC GGTAGTGCTT CGGATGGGCA GATGTTTGTT
TCCGAAGGTC ACCCGGGTTT GATTGCCCTG CTTACGAATA AAAATATAAC CAAGACCGCT
CATAATGCCA AGTACCTCAT GAATCTGCTG GCTTCAGCCG GGCAGGAAAT ACAGGGACTG
GACTTTGATA CCATGCTTTC TGCCCACCTG CTGGGTGAAA AAAATCTGGG TATAAAAGAC
TTGGTATTTG AACACTTCGG GGTGGAAATT GCTGATGTTG AAAACATACT TACTCAGAAC
GGCAAGAAAA AGAGCTTCAG TGCATCAGAG CTTTCAGAAG CCGCCCAGTT GGTGGCTGAT
TACACCTTCC GCCTCAAGGG TCTGTTTGCC GCCCAGCTTG CCGAAACCAA TCTGATAGAT
TTGTTTGTCA ACGTTGAAAT GCCTTTGGTA CCTATATTAC TGGGTATGGA GCGTAGCGGT
ATTATGCTGG ATACCGATTT GCTCAAAGGT ATGGCCGAAA AGGTGGGCGG GCAGATATTT
AAACTGGAAG AAGCCATATA TGCCCAAGCG GGACACAGCT TCAACATAGG TTCTCCCCAG
CAGTTAGGCC GGATACTTTT TGACGAACTG AAACTGCCGG TTATCAAAAA AACCAAGACC
GGTTATTCCA CCGGGGCAGA GGTACTGGAT GAACTGAAGG GTGAACACCG GATTGTAGAC
CTGATACTTG AATATCGTAT GCTGGTCAAA CTGAAATCTA CCTATCTGGA TACTCTGCCG
CGTATGGTGA ATCCGCATAC CCGTCGCCTG CATACCAGTT TCAACCAGAC CAGAACGGCT
ACCGGCAGAT TGTCTTCCAG TGAACCGAAT CTGCAAAATA TACCCGTCAG GGGTGAAATG
GGCAGAGAAA TACGGCGGGC ATTTATTGCC CCGAAGGGTA CCGTAATGCT GGCTGGAGAT
TACTCCCAGA TAGACCTGCG GGTGCTGGCC CATCTTTCCG GAGACCCTGC CCTGATAGAG
GCTTTTCTTA AGGACCAGGA TATCCACACT GCTACCGCTG CCAGATTGCT GAATATACTC
CCGTCTGAAG TGACAAAGGA ACAACGCCGT CTGGCTAAAA CGGTGAATTT CGGAGTGATA
TATGGCATGA GCAGCTACGG GTTGGAACAG GCTACTGAGC TTTCGCTGGC AGAAGCCGAC
AAATTTATCA AGGCATATTT TGAAAAATAC CCGCGGGTAG CTATTTACTT TGCGGAGATT
AAGCATCAGG CTCGGACTAA CGGGTACGTT GAGACCCTGC TGGGAAGACG CCGGTATATA
CCTGAAATCA ATTCGCCCAA CCGTATTTTG CGTGAATCAG CCGAACGTAT GGCCATAAAT
ATGCCTGTTC AGGGTACGTC TGCGGATATT ATCAAGCTGG CTATGGTCAG GCTGGATGAA
AAACTGAAAG AAGAAAAGCT GAAAAGCCGC CTGCTACTTC AGGTGCATGA CGAGCTTATA
TTTGAAGTGC CTGACGCAGA GCTTAAGCGT ATGAGTGCTT TGCTGATGGA AACCATGTCA
GGTGCAGTTA CCTTTGAAAT ACCGCTTAAG GTTGAGCTTA AGTCCGGAGC AAACTGGGGA
GATATGGAGT AG
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| Protein sequence | MSKPVIVLFD GTNLVHRAYH VLPPLTVRKT GEVVGAAFGF ASILIKVLTD LKPDCYAISF
DKKGPTFRHE MFKDYKAQRP PMPDELVSQL GRVRQIVDAF NMPVYEQSGF EADDVLGTLA
TRAAAEGMEV IIASGDADSM QLVSPDIRIL YPGPAGSFSN TSLYDEAAVR AKYGLGPEHV
ADYKALMGDP SDNIPGVPGI GPKTAQKLIE EYGGIEDIYK NLDKISPPGL QKKLADNAEV
ARQSKILTTI VCDLPLDFSI QECRSEHYNR QKVVDLFREL EFFRLIHRLP GGENPGGGMT
DMFNTPQKVE TRYIIANGQN LDSIVKRLTE TKELALAVSG TSEEAIDARL TALAISPAEG
EAYFISAEFI GSASDGQMFV SEGHPGLIAL LTNKNITKTA HNAKYLMNLL ASAGQEIQGL
DFDTMLSAHL LGEKNLGIKD LVFEHFGVEI ADVENILTQN GKKKSFSASE LSEAAQLVAD
YTFRLKGLFA AQLAETNLID LFVNVEMPLV PILLGMERSG IMLDTDLLKG MAEKVGGQIF
KLEEAIYAQA GHSFNIGSPQ QLGRILFDEL KLPVIKKTKT GYSTGAEVLD ELKGEHRIVD
LILEYRMLVK LKSTYLDTLP RMVNPHTRRL HTSFNQTRTA TGRLSSSEPN LQNIPVRGEM
GREIRRAFIA PKGTVMLAGD YSQIDLRVLA HLSGDPALIE AFLKDQDIHT ATAARLLNIL
PSEVTKEQRR LAKTVNFGVI YGMSSYGLEQ ATELSLAEAD KFIKAYFEKY PRVAIYFAEI
KHQARTNGYV ETLLGRRRYI PEINSPNRIL RESAERMAIN MPVQGTSADI IKLAMVRLDE
KLKEEKLKSR LLLQVHDELI FEVPDAELKR MSALLMETMS GAVTFEIPLK VELKSGANWG
DME
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