| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1198 |
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| Symbol | |
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| ID | 5131945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1172100 |
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| End bp | 1172912 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530124 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001214655 |
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| Protein GI | 147669837 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAT TGCCTGAAGT TGAAACGGTA AAGAATGAAA TAATGCCCCA TTTGCTGGGT
AAAAAGATAA TCCGCATGGA AGCTTTGTGG GCCAAAACTC TTTGCCCGCC CGAAGCGGAT
TTTAACGCAC TGGCATCAGG TACATGTGTA ACCGGGCTGA GCCGCCGTGG CAAGTATATT
ATCATTAGCC TGAGCAGCGG GTTATTTATC AGTGTCCACC TGAAAATGAG CGGCGGACTG
ACGGCAATCA GGGCTGAAAA CGGTCAAGCC CCCCGCTTTA CCAGAGCCAT TTTCCATCTG
GAAAATGGAG AGCAGGTATA TTTTACCGAT ATACGCAAAT TCGGGAGGAT AACCCTGCTT
GCCGGTTTGG ACTCTGTTTT AGAAAAACTG GGGCCTGAAC CTCTGGAGGA AACTTTTACC
GCCGGTGTAT TTTGGCATCG TCTCTCAGGG CGCAAAGGAC CTATAAAAGC GGTACTGCTT
GACCAGAAGG TACTGGCTGG GGTGGGCAAT ATGTACGCAG ATGAAGCCCT GTTTAAAGCC
TGCCTGAACC CGCTCCGTTC GGCTGAAAGC CTGAGTATGG CAGAGGTGGA AAGACTGCAT
TCAGCTATTC AGTCAGTTTT ACATAAAGCT ATACAAAACA AGGGGGCAAG TGTCAGCACC
TATCATCGCC CTGACGGCTC AAAGGGCGGT GCCCAGCTGG AGTTTAATGT TGCCCATCGC
AGGGGCGAAT CTTGCCCGGT TTGCGGTGCT CCCATAACCC GCCAGCTGAT ACGCCAGCGA
GCCTGTTACT TCTGTCCCCG TTGCCAGTCC TGA
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| Protein sequence | MPELPEVETV KNEIMPHLLG KKIIRMEALW AKTLCPPEAD FNALASGTCV TGLSRRGKYI
IISLSSGLFI SVHLKMSGGL TAIRAENGQA PRFTRAIFHL ENGEQVYFTD IRKFGRITLL
AGLDSVLEKL GPEPLEETFT AGVFWHRLSG RKGPIKAVLL DQKVLAGVGN MYADEALFKA
CLNPLRSAES LSMAEVERLH SAIQSVLHKA IQNKGASVST YHRPDGSKGG AQLEFNVAHR
RGESCPVCGA PITRQLIRQR ACYFCPRCQS
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