| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1154 |
|---|
| Symbol | |
|---|
| ID | 5131329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 1131046 |
|---|
| End bp | 1132017 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640530079 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_001214611 |
|---|
| Protein GI | 147669793 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG TTTTTTCAGG TGTCCGTCCC ACAGGCCGTC TCCATCTGGG TAACTACCTT
GGAGCGGTTA AGAACTATGT AGCTTTGCAG GATGATTACG AATGTATTTA CTGCGTGGTA
GACCTTCACG CCCTGACCAC TCTGGAAGAA ACTGCCACTT TGAAAGAAAA TATATATGAG
ATGATGCTGG ATTTGCTGGC TTCGGGGCTG GATCCTAAAA AGTGCATTCT CTTTGTCCAG
TCTCAGGTAC CGGAAATAAA CGAACTCTTC ACCCTGTTTG GCATGATTAC CCCTTTAAGC
TGGCTGCTTC GGGTGCCCAC CTTTAAGGAA AAGGTAAAAA TGCACCCTGA CAATGTGAAC
TACGGTCTGG TGGGTTATCC GGTGCTTCAG GCGGCAGATA TATCCCTTTA CAAGGCGGAT
GTGGTGCCGG TGGGGGTAGA CCAGCTGCCC CATTTGGAGC TTACCCGTGA AATAGTTCGC
CGTTTCAATG AAAAGTTCGG GGATACCTTT CCCGAGCCTC AGGCAAGGCT GACCAATTTC
CCCACTGTGG TTGGTCTGGA CGGCAAGGAT AAAATGAGTA AGTCCCTCAA CAACCATATT
GAACTGGCTC TGTCAGAGGA AGAAACTGCC AAAAAAGTAA TGAGTGCAGT TACTGACCCT
GCCCGCCAGT ACAAGACCGA CCCCGGTCAC CCGGATATTT GCAATGTTTA CAAATTGCAC
AATTATTTCA GCCCGCAAGC GGTTGCCCAG ATTACCGATG ATTGCCAAAA TGCCCGCATA
GGCTGTGTCC AGTGCAAACG GGCTCTAGCC GAAGCTATCA ACGCTTACCT GCGTCCCATT
CGGGCAAAAA GAAGCGAACT GGCTAAAAAC CCGGACGAGA TTTACCGCAT AATGGCAGAC
GGGGCGGAAA GAGCCGGAGT CATCGCCCGC CAGACGCTGG ACGAGGTCCG TGAGAAAATG
AATCTCCGCT AA
|
|---|
| Protein sequence | MKRVFSGVRP TGRLHLGNYL GAVKNYVALQ DDYECIYCVV DLHALTTLEE TATLKENIYE
MMLDLLASGL DPKKCILFVQ SQVPEINELF TLFGMITPLS WLLRVPTFKE KVKMHPDNVN
YGLVGYPVLQ AADISLYKAD VVPVGVDQLP HLELTREIVR RFNEKFGDTF PEPQARLTNF
PTVVGLDGKD KMSKSLNNHI ELALSEEETA KKVMSAVTDP ARQYKTDPGH PDICNVYKLH
NYFSPQAVAQ ITDDCQNARI GCVQCKRALA EAINAYLRPI RAKRSELAKN PDEIYRIMAD
GAERAGVIAR QTLDEVREKM NLR
|
|---|
| |