Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1113 |
Symbol | |
ID | 5131957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1103547 |
End bp | 1103951 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640530037 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_001214570 |
Protein GI | 147669752 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGATT TGGTTGATAC CGCATTTGGA AATATAAACC TTTCCGTCTT GTGCAAAGCA GTTACCCAAA CTGGTCTTAT AGGCACCCTC CGGGGCGGGC CTTTTACCAT ACTGGCACCG GATAACGACG CTTTTGCCAA AATGCCTGAC GGCATGCTGG ATTACCTGAT GGAAAATGAA TCTGAATTGA AATCTATACT GCTTTACCAC CTAATACCTG GCCGCCATAC AGTTGAAGAG CTGACTAAAC TGTACTCCAC CAATACCGCT CTGGATAAAC CGGTGGAGAT TCAGGTTTCT GGCAAAATGC TGGCATTAAA TACCTCTCAT GTTGTCACCA AAAATCTGGA AGCCACAAAT GGTTTGATAC ACGTTATTGA CAAAGTGTTA CTTCCGCCCA AATAA
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Protein sequence | MLDLVDTAFG NINLSVLCKA VTQTGLIGTL RGGPFTILAP DNDAFAKMPD GMLDYLMENE SELKSILLYH LIPGRHTVEE LTKLYSTNTA LDKPVEIQVS GKMLALNTSH VVTKNLEATN GLIHVIDKVL LPPK
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