Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1052 |
Symbol | |
ID | 5131086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1047530 |
End bp | 1048384 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640529977 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_001214510 |
Protein GI | 147669692 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000281715 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGCG CCACACTCAA GATTCACTGC ACGGATAAAA AAGGCATCAT TTCCAGTATT TCAAGCTTTA TTTACCGTAA TAACGGCAAT ATAATCACTC TGGACGAATT TGTAGACCAC CCGTCCAATA CTTTCTTCAT GCGCTTGGAA TGGGATATCT CAGCCTTCAC ACTTAGCCGT GAACAGATGG AATCCGAGAT TGCAACTATG GGGCAGGAAT ACAACTATGC AGATAACTGT CAGATATTCT ACTCTGACAG GAAACCCCGC CTAGCTATAT TCGTATCTAA ATACGACCAT TGCCTGTGGG ATATACTGCT CAGGTATAAA GCCGGTGAAC TGAAGTGCGA TATCCCTCTG ATTATCAGCA ACCACCCTGA TCTGAAACAA ATAGCCGATT TATTCGGCAT TGATTATAAA GTAGTAAAGG TTAACCCTGA AAACAAACTA GAAGCAGAAA ACGAACAAAC CCTCCTGATT TTCAAATACA ATATAGATTT CATGATACTG GCCAGATATA TGCAGGTACT TTCACCTGAA TTTGTAGCCC GTTTTGAAAA CAGGATAATA AATATCCACC ATTCGTTCCT TCCGGCCTTT GAGGGGGCGC GCCCTTACCA TCAGGCTATT GAACGCGGAG TAAAGCTGGT GGGGGCTACT GCCCATTTTG TAAATAATAA TCTGGACAAA GGCCCTATAA TCTCCCAATC CACTATGCCC ATAAGCCATG AAGACAGTGT GGAAGATCTG ATGGTAAAAG GCAGGGATAT TGAGAAGCTG GTGCTTTCGC AGGCTATGAA GATATTTTTA GACCACCGCA TCTTCGTCCA TAATAACCGC ACTATTATTC TCTGA
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Protein sequence | MVSATLKIHC TDKKGIISSI SSFIYRNNGN IITLDEFVDH PSNTFFMRLE WDISAFTLSR EQMESEIATM GQEYNYADNC QIFYSDRKPR LAIFVSKYDH CLWDILLRYK AGELKCDIPL IISNHPDLKQ IADLFGIDYK VVKVNPENKL EAENEQTLLI FKYNIDFMIL ARYMQVLSPE FVARFENRII NIHHSFLPAF EGARPYHQAI ERGVKLVGAT AHFVNNNLDK GPIISQSTMP ISHEDSVEDL MVKGRDIEKL VLSQAMKIFL DHRIFVHNNR TIIL
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