| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1018 |
|---|
| Symbol | |
|---|
| ID | 5131905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1009723 |
|---|
| End bp | 1010808 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640529943 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001214476 |
|---|
| Protein GI | 147669658 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000995532 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTA TTATTCTGGT CGGTGGACAG GGCACAAGGC TTCGGCCACT GAGCATAAAC
ACGCCTAAAT CCATGGTCCC GGTACTTAAT GTACCTTTCC TCAGCCATGT TCTGCGTCAC
CTGTCTTCTT ACGGCATCAA AGATATTATC CTTACCCAAG GGCATCTGGC TGCCCCCATT
GAACAGTATT TCGGCAACGG GCAGAGCCTT GGAGTTAATT TGGTTTATTC GGTTGAACAT
GAGGCTCTGG GCACAGCCGG AGCAATAAAA AATGCCGAGC GGTTTTTGGA TGATACTTTT
TTCACTCTGA ACGGGGATAT TTTTACCCAT CTGGATTTAG ACGCTATGCT GCAATCACAC
CGAGACAGAA AAGCACTGGT CAGCATAGCC CTGACACCGG TAGATGACCC TACCAAATAC
GGTTTGGTGG AAACAACACC TGACGGAAGG GTAAGCCGCT TTTTGGAAAA ACCGTCACCC
TCCCAGATAA CAACCAATAT GATAAATGCC GGTACATATT TAATTGAACC CGAAGTACTC
AAATATATAC CTGAGGGTGA GAACCACAGC TTTGAAAGAC AACTTTTCCC CCGCCTGCTG
AATGAATGCC AGGTGGTTTA TGCCTATCCT TCCAGTGCAT ACTGGATAGA CATTGGCAGC
CCCGAAAAAT ACTCCCAGCT AAACAGGGAT TTACTCTGCG GCGAGGGCGG AGATTTTGGT
TTCAGCCGAG GTAATGAAAT AATCATTGGC CGCGGTTGCC AGCTTCACCC CACAGCCCAA
ATCAGCGGGC CGGTACTGGT GGGAGAAAAT TGTGTTATAG GCGCAAATGC CCGTATCACA
GGGCCAGTAG TTATCGGCGC GGAATGCCGG ATTGAAGATG AGGCTACCCT TACCGAATCT
GTTATCTGGC GGAATGTGAC CATAGGAACC GAATGTAAAG TTGTTTCGTC CATCATTGCC
AATCATTGCC ACCTGAAAGC CGGCGGCAAA TATGAAAACG TGGTGTTGGG AGACAATGTG
ACCGCCGAAT GCGGTTGCGC GCCGGAACCC GGCAGCAAAG TCTGCCCGGG TATCCTTATG
ATCTAA
|
|---|
| Protein sequence | MKAIILVGGQ GTRLRPLSIN TPKSMVPVLN VPFLSHVLRH LSSYGIKDII LTQGHLAAPI
EQYFGNGQSL GVNLVYSVEH EALGTAGAIK NAERFLDDTF FTLNGDIFTH LDLDAMLQSH
RDRKALVSIA LTPVDDPTKY GLVETTPDGR VSRFLEKPSP SQITTNMINA GTYLIEPEVL
KYIPEGENHS FERQLFPRLL NECQVVYAYP SSAYWIDIGS PEKYSQLNRD LLCGEGGDFG
FSRGNEIIIG RGCQLHPTAQ ISGPVLVGEN CVIGANARIT GPVVIGAECR IEDEATLTES
VIWRNVTIGT ECKVVSSIIA NHCHLKAGGK YENVVLGDNV TAECGCAPEP GSKVCPGILM
I
|
|---|
| |